<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP17826
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MSDPAGEIVHITQGYIPLSKVLTRLAQSTHNALQDQIAALAKMPLPTAAMNGNSTVPSSDVEDGSGENIAKKTSILNFAMREHRKWVKALVITEWSRKADMVSKLIDLRFHLQGQEVLFSGALDVMGHVKRDLTFARMPSPDLKTALQVLSTGEAAWMPDLSYIEPPPLTRQEQIQWISDLDTQLSLRLNLEDFDKIPYHFRNYEIDSGRVKFKVAGEFEVDLTIADEDFEKQFWFIDFRFAFEPAASSIPDGLKNYLEGQVNDILSKDGLLGCYQFLHELVLTHKLNELKRQASQLSRGSWTGTLRVEPLNRALAIQYWTSRTQLGSPKSWILIAVNSGRKPNGQPDPKSSSHLTAKWYRDNKEVKDTNITFDADNLSAETLLKTVIGRHVEFLLGSIHNRLQAFPRFQNRDAAMILNISHDDPATSFLSMQVGYKDSASLLVEPTTGVFAVKPHSKFTIQHEHLLNNGKNPADDGAACLENVRCGVMEDELIRRGSTTGWTTKKSSMTKDELRSLTNTREWTKTIWLQRTGWDPNWFVMVMLSPNGDAWWLVDVSRNANGQSNRLSSKLPLNKGYPHLEDEFWNNLTLFATGMIAQAVDQHELYRHNIKFLLQDTRNWSLPQQVRLPTLEISLSDIFPSMVFNMAEKDNANAADESNAGTETSRLGPVAPTASTSGISTRQPWAHDIVSIRFKGVEPVDKEASGAGGPISDVSFMCVSDAIIKVRKPAKFAMLKGHMVGRDVSWKARTGEFCLRMRSNIGRSILENLKARVKAVDRFVSFFESLDKARGFIKAESVSLKEVTFSYGPPASQAVENAEASRLWRVALDLSNNDIDIQVQETNPHLPVTDLMQKLVNGANGIGALMDWLPVSLPTMEAFKKIREAWSDIEARRQGRFTFVMNSTDEMSFEYLLAGTGAGNQQVQRSITFLGQIKQRRGEPWWHIERKIPSSGWPSNDEFSAALKPVWDGKGDNWRGLVTGAAGRPENGIIGLLLAIDEAIRPLAGSTFQNNSELVILE |
Length | 1018 |
Position | Tail |
Organism | Gibberella nygamai (Bean root rot disease fungus) (Fusarium nygamai) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes>
Hypocreomycetidae> Hypocreales> Nectriaceae> Fusarium>
Fusarium fujikuroi species complex.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.349 |
Instability index | 34.35 |
Isoelectric point | 6.46 |
Molecular weight | 113992.14 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP17826
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 78.84| 25| 51| 180| 204| 1
---------------------------------------------------------------------------
180- 204 (45.68/32.11) DLDTQLSLRLNLEDFDK.................IPYHFRNY
216- 257 (33.16/21.20) AGEFEVDLTIADEDFEKqfwfidfrfafepaassIPDGLKNY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 444.62| 138| 144| 648| 791| 2
---------------------------------------------------------------------------
652- 723 (92.23/64.41) ......................................................................ANAADESNAGTE.TSRLGPVAPTASTSGISTRQ..PW..AHDIVSIRFKGVEPVDKEASGAGGPISDVSFMCVSDA..I
724- 862 (202.14/145.46) IKVRKPAKFAMLKGHMVGRDVSWKaRTGEFCLRMRSNIGRS...ILENLKARVKAVDRFVSFFESLDKARGFIKAESVSLKEvTFSYGPPASQAVENAEASRL...WrvALDLSN...NDID.IQVQETNPHLPVTDLMQKLVNGAngI
869- 968 (150.26/104.62) LPVSLPTMEAFKKIREAWSDIEAR.RQGRFTFVMNSTDEMSfeyLLAGTGAGNQQVQRSITFLGQIKQRR.................................gePW..WHIERKIPSSG.WPSNDEFSAALKPVWD............
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 151.96| 47| 49| 423| 471| 3
---------------------------------------------------------------------------
423- 471 (71.21/59.99) DDPATSFLSMQVGYKDSASLLVEPTTGvFAVKpHSKFTIQHEHLLNNGK
475- 521 (80.75/57.25) DDGAACLENVRCGVMEDELIRRGSTTG.WTTK.KSSMTKDELRSLTNTR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
4| 249.92| 108| 216| 302| 421| 4
---------------------------------------------------------------------------
302- 362 (63.09/46.65) .................................................................................................................................................................WTGTLRvepLNRALAIQYWTSRTQLgSPK..SWILIAVnsGRKPNGQPDPKSSSHLTAKWYRD
363- 421 (44.63/37.56) NKEVKDtNITFDADNLSAETLLKTVIGRH.VEFLLGSIHNRlqAFPRfQNRDAAmiLNIS....................................................................................................................................................................
523- 579 (77.83/39.76) ............................................................hddpatsflsmqvgykdsasllvepttgvfavkphskftiqhehllnngknpaddgaaclenvrcgvmedelirrgsttgwttkkssmtkdelrsltntreWTKTIW...LQRTGWDPNWFVMVML.SPNgdAWWLVDV..SRNANGQSNRLSSKLPLNKGYPH
581- 634 (64.37/31.32) EDEFWN.NLTLFATGMIAQAVDQHELYRHnIKFLLQDTRNW..SLPQ.QVRLPT..LEIS....................................................................................................................................................................
---------------------------------------------------------------------------
|