<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP17794
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MDLIYALFRKHTTNSAKSLQNYEWYTLHEGHTLCSVSSQNIVAFTTTTELEDISGKTWGSHVYVADLNTPWHSHKVVSNKAGVTALEWDMPGDKLLLADTAGNVQLWSFRDHILNDWLCLGTASFPGEHILGAAFFHNGKKISLVSEKKDNIFYNEKFTHLRFPPSVRYFGGRPMEGCLVISTTGMVGVVIASREGHQGSPQLIITSDSLGSTRHRITAVDICYGKNGHFLVAVSSGSVSLPIQCFRVSVKQSDDKCIIMSQALPSFFLQSSPIKENQYRHVVQLKFVVREDADSLVVAANGDSGCLVEIWELREKPMPIHKLFQPKSHSSQPEPFKTVLWQHQSHFMSSSPVVCITTSKLSITTAMPPPCYVMVALADGSIHCLYRDSLKQVATASLNQAWRQEEAPTSKQQRLGLRISHLDMSWLGCILVAADTQGQLYLYRLLPIAEPGGPMTVPYACTLLEYCLVTGLDWWDLLVSLRPSMMDTVCERFTESFNRQLQHVQQFHYVQFLNIKTSLYRLTVNGQSKAADLTSLLMLHSVATAFKSLLRPSDLSSHDKGPAESLAAVMMDSLTDVDKVLFHLEAKEFTVEPSTLQSLQQLIQWVADLALNLLARLPEQRQPGKSSGYELLRDYKALNTLRELLVIIRIWGLLRQSCLPVFVRSAENLDVLALLFKLLSRLIQTSEPDENLLDECCLLPSQVMIPQLNPSTKIVAVASPALFYQSLPIQLEFGVEPESLYFVPELSPVEGAMQTEQTVDSIRHIYLGRQPLVVKQCSRCGCKAQVQSMTRTAAIRAWDQRWARACRCGGHWRIHRFL |
Length | 818 |
Position | Tail |
Organism | Cryptotermes secundus |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota>
Neoptera> Polyneoptera> Dictyoptera> Blattodea> Blattoidea> Termitoidae>
Kalotermitidae> Cryptotermitinae> Cryptotermes.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.040 |
Instability index | 49.50 |
Isoelectric point | 7.33 |
Molecular weight | 91777.81 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP17794
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 46.41| 12| 61| 270| 281| 5
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270- 281 (22.86/13.06) QSSPIKENQYRH
332- 343 (23.55/13.66) QPEPFKTVLWQH
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 39.40| 11| 39| 700| 710| 7
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700- 710 (22.11/11.65) P.SQVMIPQLNP
737- 748 (17.29/ 7.71) PeSLYFVPELSP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 34.33| 12| 483| 231| 244| 11
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231- 244 (17.52/17.15) LVAVSSG...svSLPIQ
714- 730 (16.81/ 8.65) IVAVASPalfyqSLPIQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 82.91| 26| 146| 195| 224| 13
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195- 224 (42.41/35.24) EGH..QGSPQLIITSDSLGSTrhriTAV.DICY
344- 372 (40.50/23.64) QSHfmSSSPVVCITTSKLSIT....TAMpPPCY
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