<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP17790

Description Uncharacterized protein
SequenceMTSSIGGTASTMETAAGLSDFAQHVLRQICSQEWVLERCLQNPEELCHTDMLLDSMLTPKQAQRLLHMICYPETTAATEESLDQRDIIARILENLDQWTLRMSWLDLQLMFTQFPPGSSELNQWLDTVAKAAIDVFQLTSGGATGGLDGKEENRSGLRPNKPGSIWLVAPLVSKLPSAVQGRVLKVAGQVLESGNWSSKNRDKERNVQRSSSLLSHQPFLSLVLTCLKGQDEQREGLLTSLHSQLNQFLMLSKDERLSNYEDPKGRALMQDALQLRFSLVGGMFDTIQRNTTVTTDWAILLVQLISYAVIDLNNNSELFTVVIDMLATLIHSTLVSDSQSEKEENRKHYQNLMKKLKKELGDRTSPSIQYVRQLLPLPKVTAEVVVCQPMGCLTDTKGNKIAGFDSIDKKQGLQVFEKQRVSPWDLLEGHKNPAPLSWSWFGAVRMERKPLWYEDTHRLLKYHTHSLLKSPAYFLDPPPLPPEDLDPPQEKPCSCVYCNQLKDDGKADTPNSSDQSPRGVGGNKRPKAQRRRRPKAGGPGVPANGQPVMSGMPQQVQVYIEQACTALSFVNHISCF
Length576
PositionKinase
OrganismCryptotermes secundus
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Polyneoptera> Dictyoptera> Blattodea> Blattoidea> Termitoidae> Kalotermitidae> Cryptotermitinae> Cryptotermes.
Aromaticity0.06
Grand average of hydropathy-0.421
Instability index50.94
Isoelectric point6.87
Molecular weight64460.94
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP17790
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     242.68|      79|     190|      39|     154|       1
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   39-  140 (116.28/171.57)	CLQNPEElcHTDMLLDSMLTPKQAQRLLhmicypettaateeSLDQRdiiariLENLDQWTLRMSWLD.LQLMFTqFPPGSSELNQWLDTVAKA.AIDVFQLTS
  226-  306 (126.40/90.25)	CLKGQDE..QREGLLTSLHSQLNQFLML..............SKDER......LSNYEDPKGRALMQDaLQLRFS.LVGGMFDTIQRNTTVTTDwAILLVQLIS
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     139.81|      39|     375|     142|     180|       2
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  142-  180 (67.86/37.91)	GATGGLDGKEENRSGLRPNKPGSIWLVAPLVSKLPSAVQ
  519-  557 (71.95/40.61)	GVGGNKRPKAQRRRRPKAGGPGVPANGQPVMSGMPQQVQ
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP17790 with Med12 domain of Kingdom Metazoa
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