<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP17788

Description Uncharacterized protein
SequenceMSFIDCLLRAMTSSIGGTASTMETAAGLSDFAQHVLRQICSQEWVLERCLQNPEELCHTDMLLDSMLTPKQAQRLLHMICYPETTAATEESLDQRDIIARILENLDQWTLRMSWLDLQLMFTQFPPGSSELNQWLDTVAKAAIDVFQLTSGGATGGLDGKEENRSGLRPNKPGSIWLVAPLVSKLPSAVQGRVLKVAGQVLESGNWSSKNRDKERNVQRSSSLLSHQPFLSLVLTCLKGQDEQREGLLTSLHSQLNQFLMLSKDERLSNYEDPKGRALMQDALQLRFSLVGGMFDTIQRNTTVTTDWAILLVQLISYAVIDLNNNSELFTVVIDMLATLIHSTLVSDSQSEKEENRKHYQNLMKKLKKELGDRTSPSIQYVRQLLPLPKVTAEVVVCQPMGCLTDTKGNKIAGFDSIDKKQGLQVFEKQRVSPWDLLEGHKNPAPLSWSWFGAVRMERKPLWYEDTHRLLKYHTHSLLKSPAYFLDPPPLPPEDLDPPQEKPCSCVYCNQLKDDGKADTPNSSDQSPRGVGGNKRPKAQRRRRPKAGGPGVPANGQPVMSGMPQQVQQQPQPPVPHMAYPNQGAMFPTQSQWTYNQQQQQQQQQQQQQQQQQQQQQQQQGYYSSQQLQAVGGPRFERPLNQSNPKQALSQMLRMRLPSNQYLGSQQPPPGFPQSMQRQQFIRQQLRAQHGAPGMQPPPQQGMFPQQQGAPAMYTGMQQGMNQSYAGYGGQPGPQMVSQQQLMGQAGQGMMGGFPGQQGGGFVSQQQPPGMMTTGGPIAPQQPRGAGDYMGPQGGMTAQQRAMAVQQGARPTYLQAPNVTMAAMGGPMGQQGQGQPQPAPPYGRAGAGGPSGAQGPPPPHTAQQQQQQNQQFQQQRMRQQMIAAQQPNQQAPALVAHLQRQLSQQQAGGNQPNQQHHPYSHQPPPY
Length925
PositionKinase
OrganismCryptotermes secundus
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Polyneoptera> Dictyoptera> Blattodea> Blattoidea> Termitoidae> Kalotermitidae> Cryptotermitinae> Cryptotermes.
Aromaticity0.06
Grand average of hydropathy-0.733
Instability index61.82
Isoelectric point9.08
Molecular weight102596.95
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP17788
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     114.32|      23|      23|     717|     739|       1
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  682-  706 (34.14/ 7.60)	RQQLRAQHGAPGMQPPPQqgMFPQQ
  717-  739 (48.61/14.37)	QQGMNQSYAGYGGQPGPQ..MVSQQ
  746-  765 (31.57/ 6.39)	GQGM...MGGFPGQQGGG..FVSQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     103.67|      15|      15|     595|     609|       2
---------------------------------------------------------------------------
  595-  609 (27.95/ 7.97)	NQQQQQQQQQQQQQQ
  664-  678 (25.51/ 6.39)	SQQPPPGFPQSMQRQ
  778-  792 (25.23/ 6.22)	APQQPRGAGDYMGPQ
  909-  923 (24.98/ 6.06)	NQPNQQHHPYSHQPP
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     116.32|      22|      23|     815|     836|       3
---------------------------------------------------------------------------
  554-  576 (33.39/ 9.27)	NGQPVMSGMPQQVQQQPQPPvPH
  815-  836 (41.87/13.80)	APNVTMAAMGGPMGQQGQGQ.PQ
  838-  859 (41.06/13.37)	APPYGRAGAGGPSGAQGPPP.PH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     322.93|     108|     190|      49|     164|       4
---------------------------------------------------------------------------
   49-  164 (172.60/152.64)	CLQNPEElcHTDMLLDSM.......LTPKQAQRLLHmicY..PETTAATEESLDQR.DIIARILENLDQ.WTLRMSWLDLQLMFTQFPPGSSELNQWLDTVAkaaIDVFQ..LTSGGATGGLDGKEENR
  236-  356 (150.33/109.85)	CLKGQDE..QREGLLTSLhsqlnqfLMLSKDERLSN...YedPKGRALMQDALQLRfSLVGGMFDTIQRnTTVTTDWAILLVQLISYAVIDLNNNSELFTVV...IDMLAtlIHSTLVSDSQSEKEENR
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.88|      14|      16|     628|     641|       5
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  628-  641 (26.51/13.95)	QAVGGP.RFERPLNQ
  646-  660 (21.37/ 9.75)	QALSQMlRMRLPSNQ
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP17788 with Med12 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) PAYFLDPPPLPPEDLDPPQEKPCSCVYCNQLKDDGKADTPNSSDQSPRGVGGNKRPKAQRRRRPKAGGPGVPANGQPVMSGMPQQVQQQPQPPVPHMAYPNQGAMFPTQSQWTYNQQQQQQQQQQQQQQQQQQQQQQQQGYYSSQQLQAVGGPRFERPLNQSNPKQALSQMLRMRLPSNQYLGSQQPPPGFPQSMQRQQFIRQQLRAQHGAPGMQPPPQQGMFPQQQGAPAMYTGMQQGMNQSYAGYGGQPGPQMVSQQQLMGQAGQGMMGGFPGQQGGGFVSQQQPPGMMTTGGPIAPQQPRGAGDYMGPQGGMTAQQRAMAVQQGARPTYLQAPNVTMAAMGGPMGQQGQGQPQPAPPYGRAGAGGPSGAQGPPPPHTAQQQQQQNQQFQQQRMRQQMIAAQQPNQQAPALVAHLQRQLSQQQAGGNQPNQQHHPYSHQPPPY
481
925










Molecular Recognition Features






MoRF SequenceStartStop




1) ALVAHLQRQLS
892
902