<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP17785

Description Uncharacterized protein
SequenceMTSSIGGTASTMETAAGLSDFAQHVLRQICSQEWVLERCLQNPEELCHTDMLLDSMLTPKQAQRLLHMICYPETTAATEESLDQRDIIARILENLDQWTLRMSWLDLQLMFTQFPPGSSELNQWLDTVAKAAIDVFQLTSGGATGGLDGKEENRSGLRPNKPGSIWLVAPLVSKLPSAVQGRVLKVAGQVLESGNWSSKNRDKERNVQRSSSLLSHQPFLSLVLTCLKGQDEQREGLLTSLHSQLNQFLMLSKDERLSNYEDPKGRALMQDALQLRFSLVGGMFDTIQRNTTVTTDWAILLVQLISYAVIDLNNNSELFTVVIDMLATLIHSTLVSDSQSEKEENRKHYQNLMKKLKKELGDRTSPSIQYVRQLLPLPKVTAEVVVCQPMGCLTDTKGNKIAGFDSIDKKQGLQVFEKQRVSPWDLLEGHKNPAPLSWSWFGAVRMERKPLWYEDTHRLLKYHTHSLLKSPAYFLDPPPLPPEDLDPPQEKPLKDDGKADTPNSSDQSPRGVGGNKRPKAQRRRRPKAGGPGVPANGQPVMSGMPQQVQQQPQPPVPHMAYPNQGAMFPTQSQWTYNQQQQQQQQQQQQQQQQQQQQQQQQGYYSSQQLQAVGGPRFERPLNQSNPKQALSQMLRMRLPSNQYLGSQQPPPGFPQSMQRQQFIRQQLRAQHGAPGMQPPPQQGMFPQQQGAPAMYTGMQQGMNQSYAGYGGQPGPQMVSQQQLMGQAGQGMMGGFPGQQGGGFVSQQQPPGMMTTGGPIAPQQPRGAGDYMGPQGGMTAQQRAMAVQQGARPTYLQAPNVTMAAMGGPMGQQGQGQPQPAPPYGRAGAGGPSGAQGPPPPHTAQQQQQQNQQFQQQRMRQQMIAAQQPNQQAPALVAHLQRQLSQQQAGGNQPNQQHHPYSHQPPPY
Length907
PositionKinase
OrganismCryptotermes secundus
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Polyneoptera> Dictyoptera> Blattodea> Blattoidea> Termitoidae> Kalotermitidae> Cryptotermitinae> Cryptotermes.
Aromaticity0.06
Grand average of hydropathy-0.764
Instability index61.91
Isoelectric point9.21
Molecular weight100545.49
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP17785
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     673.07|     212|     264|     388|     651|       1
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  388-  651 (322.41/125.04)	QPM.GCLTDTKGnkIAGFDSiDKKQGLqvFEKQRVSPwDLLEGHKNPAPLSWSWFGAvrmERKPlWYEDTHRLLKYHTHSLLKS.PAY....FLDPPplppedlDPPQekpLKDDGKADTPnssdQSPRGVGGNKRPK....AQRR.......RRPK.AGGPGVpanGQPVMSG.MPQQVQQQPQPPVPhmaYPNQGAMFPTQSQ.....WTyNQQQQQQQQQQQQQQQQQQ....QQQQQQG....YYSSQQL..QAVGGprfERPLNQSNpkqalsqmlrmrlPsnqYlgSQQPPP
  661-  906 (350.66/84.71)	QFIrQQLRAQHG..APGMQP.PPQQGM..FPQQQGAP.AMYTGMQQGMNQSYAGYGG...QPGP.QMVSQQQLMGQAGQGMMGGfPGQqgggFVSQQ.......QPPG...MMTTGGPIAP....QQPRGAGDYMGPQggmtAQQRamavqqgARPTyLQAPNV...TMAAMGGpMGQQGQGQPQPAPP...YGRAGAGGPSGAQgppppHT.AQQQQQQNQQFQQQRMRQQmiaaQQPNQQApalvAHLQRQLsqQQAGG...NQPNQQHH.............P...Y..SHQPPP
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.78|      12|      39|      22|      33|       2
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   22-   33 (22.57/13.28)	AQHVLRQICSQE
   62-   73 (24.21/14.72)	AQRLLHMICYPE
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      74.26|      17|      41|     277|     293|       3
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  277-  293 (27.53/18.71)	FSLVGGMFDTIQRNTTV
  302-  318 (22.09/13.69)	VQLISYAVIDLNNNSEL
  319-  335 (24.64/16.04)	FTVVIDMLATLIHSTLV
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.67|      13|      23|     203|     215|       6
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  203-  215 (20.74/12.74)	KERNVQRSSSLLS
  228-  240 (21.93/13.93)	KGQDEQREGLLTS
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP17785 with Med12 domain of Kingdom Metazoa
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