<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP17756

Description Uncharacterized protein
SequenceMRSLIRLWQSQNLRSNGLAAGGNLSLPPGSDPGRGHGGSNGSHSMPPDFDVSHIKTEPDGGSLPHSQSLSGSGSRQGFGPDMPDTGVSFQSPGNPMDSSVSNTFQFGALLSGQGSGGKGPVLLNMLSEQTSNSKKQRKRTNKDGMWRSPKRKQSEECEIVLETSSSDSTPLGTPTSRDAPMETSLDCEEEKTGSDFGEEEIMPVQEVEEIIVRKARKEKKTSPPTIILDLAESKSLVAPSVSITPITSSSSNFNSVLTGMGLERRPGIEIIPIVSTPATSLHTSITITPISSKVVAADDRNNRDRKGGKSRTEDKMRPDKKRNKRKREDSPSGCSGGSGIAMGPPDKLPPKQDPLSKPVSVSIKPTESPPLTSVRPSSPASALRKVTSSPTHLNISMTKSGSSKPSTSHQSPKHSPGYTSSPKHHGTSSPKQQSSGGSGKPSMSALKSAANSPSTAGKSGSDVAKVKSSSSKDKDRKVSSSFSGGSSGSGSSPKLKSSSVKLKQLDMTSGSGDGSTGSQGGAGTPPSVTIDGSKSLSAVPQARNRKGSLSAVIDKLKSAQHQGPEPGEVVKEGRGSGTNPSTKIPGDTSGSTVSSSSKNPGEYMVKPSSEGIKITINKTRTKDSKSGVVKTSSSSTGSGSPKTHTGLKPGVNSGPASKKPHQMLQQKSASGNSSSSGISSSSSKAGSSSASGNPSSKIPSSTKSSSSPVSGILSKSTSKSSGSPKMSSLADASRRDNKPRPPKTSSDRDKSVFSKGADARKSSPVGMRDELESERPLKLVTAHAKMEPSLPPQLMVEGMIKSLDTKFQIPKLSARSGNLNEGDSKKQSSDKTAIGGTESSSRMDSGARPLDLVGKADASNASAKFQSLSKTTDDLKGSKIPAVVSVTPQIAISSLTTQALKQPTTTFPSVSSKLQDISIDTGPQISTPTSVAIVTSLPSSSSEPSSRESVEISRMKPDLSRSAQISGNNAKEETTIQATGKLENPAKSYSANNNNDPSVLSALHPNKSLDSSQNKFTSSSSQKQAEDSKKLVNLSDISSKSTGLNKMTPTPTTSQEAAEILLDMSASTSLPNKPLPADPQPGKLATVPERAVAVSAPSRRNTPPPPLPPPQPSVQVHIVQSPAATPTTASPMVITSPHSASPCSIDDELMDEALVGMGK
Length1159
PositionMiddle
OrganismCryptotermes secundus
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Polyneoptera> Dictyoptera> Blattodea> Blattoidea> Termitoidae> Kalotermitidae> Cryptotermitinae> Cryptotermes.
Aromaticity0.02
Grand average of hydropathy-0.728
Instability index60.70
Isoelectric point9.78
Molecular weight119978.24
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP17756
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     310.56|      47|      47|     365|     411|       1
---------------------------------------------------------------------------
  360-  406 (79.10/24.84)	SVSIKPTE....SPPL.TSVRP...SSPASALRKVTS.SPTHLNISMTKSGS.SKPS
  407-  442 (58.02/15.94)	TSHQSPKH....SPGY.T.......SSPK...HHGTS.SPKQ....QSSGGS.GKPS
  455-  493 (42.50/ 9.39)	TAGKSGSD.......V.AKVKS...SSSKDKDRKVSS.S.....FSGGSSGSgSSP.
  628-  674 (36.95/ 7.04)	VVKTSSSStgsgSPKThTGLKPgvnSGPAS..KK.....PHQM..LQQKSAS.GNSS
  675-  709 (45.06/10.46)	SSGISSSS....SKAG.SSSAS...GNPSSKIP............SSTKS.S.SSPV
  710-  757 (48.94/12.10)	SGILSKST....SKSS.GSPKM...SSLADASRRDNKpRPPKTSSDRDKSVF.SKGA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     143.03|      30|      31|    1051|    1081|       2
---------------------------------------------------------------------------
  907-  929 (28.04/ 8.88)	FPSVSS......KLQDISIDT...GPQISTPT....................
 1021- 1053 (37.69/15.53)	SQKQAEdskklvNLSDISSKS..TGLNKMTPT.................PTT
 1054- 1086 (42.00/22.21)	SQEAAE......ILLDMSAST..SLPNKPLPAdPQP...........gkLAT
 1087- 1128 (35.32/13.96)	VPERA.........VAVSAPSrrNTPPPPLPP.PQPsvqvhivqspaatPTT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.42|      15|      16|      22|      36|       3
---------------------------------------------------------------------------
   22-   36 (30.79/12.50)	GNLSLPPGSDPGRGH
   41-   55 (27.63/10.46)	GSHSMPPDFDVSHIK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      89.87|      22|      22|     930|     951|       4
---------------------------------------------------------------------------
  527-  547 (31.26/14.88)	SV.TIDGS.KSLSAV.PQARNRKG
  548-  571 (23.82/ 9.09)	SLsAVIDKLKSAQHQgPEPGEVVK
  930-  951 (34.78/17.62)	SV.AIVTSLPSSSSE.PSSRESVE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.35|      18|      22|     966|     987|       5
---------------------------------------------------------------------------
  966-  987 (24.74/19.36)	SGNNAKEETTIQATgkleNPAK
  990- 1007 (31.61/15.42)	SANNNNDPSVLSAL....HPNK
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      74.47|      23|      37|     126|     148|       6
---------------------------------------------------------------------------
  126-  148 (40.32/20.64)	LSEQTSNSKKQRKRTNKDG.MWRS
  161-  184 (34.15/16.21)	LETSSSDSTPLGTPTSRDApMETS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     105.88|      21|      22|     834|     854|       7
---------------------------------------------------------------------------
  796-  814 (26.29/11.11)	VEGMIKS..LDTKFQIP.KLSA
  815-  833 (25.37/10.45)	RSGNLNEG..DSKKQSS.DKTA
  834-  854 (32.64/15.70)	IGGTESSSRMDSGARPL.DLVG
  856-  877 (21.57/ 7.71)	ADASNASAKFQSLSKTTdDLKG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     161.77|      54|     301|     277|     333|       9
---------------------------------------------------------------------------
  189-  225 (28.43/ 9.13)	...........................EEKTGSDFGEE.EIMPVQeveeiivRKARKEKKTSPPT
  233-  272 (48.91/22.71)	SKSLVAPSVSITPITS...SSSNFNSVLTGMGLERRPGiEIIP......................
  277-  333 (84.44/51.11)	PATSLHTSITITPISSkvvAADDRNNRDRKGGKSRTED.KMRPDK.......KRNKRKREDSPSG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      40.37|      11|     235|     337|     349|      10
---------------------------------------------------------------------------
  337-  349 (18.31/ 9.70)	GSGiaMGPPDKLP
  575-  585 (22.06/ 7.28)	GSG..TNPSTKIP
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP17756 with Med1 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) KQPTTTFPSVSSKLQDISIDTGPQISTPTSVAIVTSLPSSSSEPSSRESVEISRMKPDLSRSAQISGNNAKEETTIQATGKLENPAKSYSANNNNDPSVLSALHPNKSLDSSQNKFTSSSSQKQAEDSKKLVNLSDISSKSTGLNKMTPTPTTSQEAAEILLDMSASTSLPNKPLPADPQPGKLATVPERAVAVSAPSRRNTPPPPLPPPQPSVQVHIVQSPAATPTTASPMVITSPHSASPCSIDDELMDEALVGMGK
2) LHTSITITPISSKVVAADDRNNRDRKGGKSRTEDKMRPDKKRNKRKREDSPSGCSGGSGIAMGPPDKLPPKQDPLSKPVSVSIKPTESPPLTSVRPSSPASALRKVTSSPTHLNISMTKSGSSKPSTSHQSPKHSPGYTSSPKHHGTSSPKQQSSGGSGKPSMSALKSAANSPSTAGKSGSDVAKVKSSSSKDKDRKVSSSFSGGSSGSGSSPKLKSSSVKLKQLDMTSGSGDGSTGSQGGAGTPPSVTIDGSKSLSAVPQARNRKGSLSAVIDKLKSAQHQGPEPGEVVKEGRGSGTNPSTKIPGDTSGSTVSSSSKNPGEYMVKPSSEGIKITINKTRTKDSKSGVVKTSSSSTGSGSPKTHTGLKPGVNSGPASKKPHQMLQQKSASGNSSSSGISSSSSKAGSSSASGNPSSKIPSSTKSSSSPVSGILSKSTSKSSGSPKMSSLADASRRDNKPRPPKTSSDRDKSVFSKGADARKSSPVGMRDELESERPLKLVTAHAKMEPSLPPQLMVEGMIKS
3) NGLAAGGNLSLPPGSDPGRGHGGSNGSHSMPPDFDVSHIKTEPDGGSLPHSQSLSGSGSRQGFGPDMPDTGVSFQSPGNPMDSSVSNTFQFGALLSGQGSGGKGPVLLNMLSEQTSNSKKQRKRTNKDGMWRSPKRKQSEECEIVLETSSSDSTPLGTPTSRDAPMETSLDCEEEKTGSDFGEEEIMPVQEVEEIIVRKARKEK
4) TKFQIPKLSARSGNLNEGDSKKQSSDKTAIGGTESSSRMDSGARPLDLVGKA
901
281
16
805
1159
802
219
856










Molecular Recognition Features






MoRF SequenceStartStop




1) AAEILLDMS
2) KLATVPERAVAVS
3) KLKSSSVKLKQLDMT
4) MRSLIRLW
5) RPLKLVTAH
6) SKKPHQML
7) SLSAVIDKLKSAQ
8) VHIVQ
1057
1083
494
1
775
657
548
1116
1065
1095
508
8
783
664
560
1120