<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP17745

Description Uncharacterized protein
SequenceMVVGPGDHGLQADIIFVIEGTAINGAYLNDLKSNYVIPTLEYFSQGTIEEREYVAESTSTQYGLVIYQAADCLPNPSSDCYGPYSSPQKLLNILDKIELVGGKGESHANIAEGLATALQCFEDLQQRREPNLLPQKHCILVCNSPPYLLPVMESATFAGHSVEQLAVLLQERGIHLSILSPRKIPALFKLYEKAGGDLQTSQTKNYAKDPRHLVLLKGYSLKERPISPTPGPIGHPTANISSMPSSSPNQNNGSPMGTMPPCPGGAAGMPQQQTPMMNSQGVQPAVFRPAQTQGLVMSPQQQHPPQGVMHPNPRNAILFPQQPPQSYPSQGILVQNRPPRWPLPIMQPQQQSRQFPNQSALIAQLTQPSMGPAVNPTALAVSGQFNQNNPPPVMGQQQQMHNMSRVPQQAGQGGSMNLPSMVGPGPGQQQGPGQQAQPPPQPNQSGAPSGQQPQNIGPQQTVATPQQGTPPGGQPSVPQQQPGQPPVVGNQQRQPLWQGVVEWIEKAKSPNDTQKLTRHVPCQVSSNPREGETDLKADSWPQKLIMQLMPKQLIGNIGGAYLKNSKSVLFHPQNCEALESLTKVMSSGFAGCVHFTSISSPQTCDIKVLILLYTAEKRAYLGFIPNDQAAFVDRLRKVIQHQKTTQALIRQQGGQASAGALPAPSAGLSMNPQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLSGSMGAQGGGPQPGQQQTNPQQGPQGGIMMSQTNPMTMGGGQITQNVVTSAAQQMQQQVVSLGQQGAGGAGGANSQASPAQLSGLQNAERHLGGPGGNQQQPGAGGPIRGAQGMMPGAPQRPPFDNIEAARQQNLAKIQHLRQTLEAAQQQELQYKSQLEIISHMKIQQLQQNLEMAQQQEMQFKAQMEQEQQKQLRVQLQQLTQQQQQQQRQMAPQGMQPSQPQQQQQPNQQQRMVRPVLANNPGLRHLLQQQPQYRQQVLNMQQLGGLRGQQQNPGGQPQQQQQQQQFDDVSSFDFLT
Length1003
PositionUnknown
OrganismCryptotermes secundus
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Polyneoptera> Dictyoptera> Blattodea> Blattoidea> Termitoidae> Kalotermitidae> Cryptotermitinae> Cryptotermes.
Aromaticity0.04
Grand average of hydropathy-0.751
Instability index72.63
Isoelectric point9.04
Molecular weight109263.78
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP17745
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             7|     429.11|      48|      48|     255|     302|       2
---------------------------------------------------------------------------
  255-  302 (91.48/21.57)	PM.....GTMPP..CPG..GAAGMPQQQTPMMNSQGVQPAVFRPAQTQGLVMSPQQQ
  305-  351 (74.46/15.83)	PQ.....GVMHP..NPR..NAILFPQQPPQSYPSQGILVQ.NRPPRWPLPIMQPQQQ
  369-  409 (48.69/ 7.15)	SM.....G..PA..VNP..TALAVSGQ....FNQNNPPPVMGQQQQMHNMSRVPQQ.
  448-  481 (56.02/ 9.62)	PS.....GQQPQniGPQ..QTVATPQQGTP....PGGQPSV............PQQQ
  693-  737 (57.64/10.17)	QQ.....QQQQQ..QQQlsGSMG.AQGGGPQPGQQQTNPQ..QGPQGG..IMMSQTN
  912-  936 (46.74/ 6.50)	Q........................QQRQ..MAPQGMQPS..QPQQ....QQQPNQQ
  948-  987 (54.07/ 8.97)	PGlrhllQQQPQ..YRQ..QVLNM.QQLGGL...........RGQQ.QNPGGQPQQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      88.56|      24|      27|     840|     863|       3
---------------------------------------------------------------------------
  840-  863 (43.85/15.63)	KIQHLRQTLEAAQQQELQYKSQLE
  869-  892 (44.71/16.08)	KIQQLQQNLEMAQQQEMQFKAQME
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     126.77|      33|      36|     756|     790|       6
---------------------------------------------------------------------------
  484-  516 (49.71/15.87)	QPPVV..GnQQRQPL.WQGVVEWIEKA.K.SPNDT.........QKL
  759-  802 (43.83/16.80)	QQQVVslG.QQGAGG.AGGANSQASPA.QLSGLQNaerhlggpgGNQ
  803-  836 (33.23/ 8.18)	QQP........GAGGpIRGAQGMMPGApQRPPFDN....ieaarQQ.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     188.62|      53|      55|      54|     108|       7
---------------------------------------------------------------------------
   25-   52 (21.63/ 6.77)	................................GAYLNDLKSNYVIPTLEyFSQGTIEERE
   54-  108 (84.11/57.82)	VAESTSTqyGLVIYQAADCLPNPS....SDCYGPYSSPQKLLNILDKIE.LVGGKGESHA
  110-  166 (82.87/50.46)	IAEGLAT..ALQCFEDLQQRREPNllpqKHCILVCNSPPYLLPVMESAT.FAGHSVEQLA
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP17745 with Med25 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) LNMQQLGGLRGQQQNPGGQPQQQQQQQQFDDVSSFDFLT
2) QALIRQQGGQASAGALPAPSAGLSMNPQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLSGSMGAQGGGPQPGQQQTNPQQGPQGGIMMSQTNPMTMGGGQITQNVVTSAAQQMQQQVVSLGQQGAGGAGGANSQASPAQLSGLQNAERHLGGPGGNQQQPGAGGPIRGAQGMMPGAPQRPPFDNIEAARQQNLAKIQHLRQT
3) QGVVEWIEKAKSPNDTQKLTRHVPCQVSSNPREGETDLKADSWP
4) QKQLRVQLQQLTQQQQQQQRQMAPQGMQPSQPQQQQQPNQQQRMVRPVLANNPGLRHLLQQQP
5) RPISPTPGPIGHPTANISSMPSSSPNQNNGSPMGTMPPCPGGAAGMPQQQTPMMNSQGVQPAVFRPAQTQGLVMSPQQQHPPQGVMHPNPRNAILFPQQPPQSYPSQGILVQNRPPRWPLPIMQPQQQSRQFPNQSALIAQLTQPSMGPAVNPTALAVSGQFNQNNPPPVMGQQQQMHNMSRVPQQAGQGGSMNLPSMVGPGPGQQQGPGQQAQPPPQPNQSGAPSGQQPQNIGPQQTVATPQQGTPPGGQPSVPQQQPGQPPVVGNQQRQPL
965
646
498
896
224
1003
847
541
958
496










Molecular Recognition Features






MoRF SequenceStartStop




NANANA