Description | Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MPGVIMENGRNGSHTNHDRDQRLNGVNGANYAPEKSPEKGKGRAEPQQSMTPISPTIPNGVNGNFLDASQQQNGLGDSIPQDLQERINQLPPEIAHITQGYLPLSRLLSRLAQKTHSDLSSTILELAQMPVPSSAVNGNTSHITTSDDSSPENLTKKLRLVKFAQDAHTEWTKALVITGWSRRAEDVSRTIDLKIHLDDQAQYYENAVYELGEVKKGLIHARLPNPDLPTALEVLTTGKASWMPDLGYIQPPPLNAKEILKSLENLNTLLSIRLNLHDYDSIPFHFKNFEIKSGRVTFKVAGEFEIDLTIADEDPEAQFWFIDFRFMFLPSVPTLTPQIRYHIESKVNEALAKDGLAGCYKYLHEMVLTHKINEFKKQAFDLAGAKWIETLKVEALNRALSVQYWLDRYPKGLRSWIILGVHSGKRKDGRPDPKATSRLFIRWFRDSKEVPDVDVQFDTVNITTESLLKTVIAKHVSYILTSIHDNLAAKPLFANRELALSLSISSTEPAESELKVQLTNEQHLTVKIEPISGRILFSPASQLNTKCESQLNGKSPNPAIDGHSYIEVLRGQLLAEEIVNRGLSIGWIRIPIPGLKADALQPYLPKGPQPNFLWFRRSGWAENWCIAVMMTTGGEQWLLLETADAPPNNSSSNVAQGRRITSFIKIPSKLASPVPTYEFLSTLNIFSAALVSHYCNLRSLHGKRAAHMLRQSGPSKAVTLPSIYIRLSEILVSKGKSARTNKEWAKGVVRLTFQGLELLPPKSDDAIPPVPENQPSGDLVQRRPTPQERAVLISEARMIVPPPGQPNVLVNINEKVDKDIAFDPETGSFAFRLRSRVGESVIPDLIERLVRVERLVEFIQVFQKHEKALKCESVSLGKIVFTYGNIAAGNRSDAMDLDTTTSHPYKATVDFNAMETSMTLVLERHNPHLRILDYLVMVLNGSGGLNDVASLLPLTLPVLRGLDAIETAWTPAPDTEKGEVFVNVRAVDWYMIRYDLKQTASTPDSPPTMRKIMFEVRLRHRRGEPWWYVRRSDTINRTSKDVDEIDEALKSVWKSKGTGWEGMRVSGVAQVHGVEELLEKVDEVIRCLPILNAEAPNAPAPTLAAVPAAALSKQVRPQAPQQQQRQQPTPNQSQGQSQSQGRSNPLKREVVEID |
Length | 1154 |
Position | Tail |
Organism | Hyaloscypha variabilis F |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Leotiomycetes> Helotiales> Hyaloscyphaceae> Hyaloscypha> Hyaloscypha variabilis. |
Aromaticity | 0.07 |
Grand average of hydropathy | -0.370 |
Instability index | 46.54 |
Isoelectric point | 7.99 |
Molecular weight | 128886.55 |
Publications |
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082 |
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP17714 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 70.83| 20| 30| 750| 769| 1 --------------------------------------------------------------------------- 750- 769 (35.62/16.99) RLTFQGLELLPPKSDDAIPP 783- 802 (35.21/16.72) RPTPQERAVLISEARMIVPP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 371.20| 159| 316| 131| 311| 2 --------------------------------------------------------------------------- 131- 257 (132.78/126.31) ..............................................................VPSSAVNGNTSHITTsddsspENLTKKL..RLVKFA.QDAHTEW.TKALVIT.....GWSrraedVSRT....IDLKIHLDDQaQYYenavyelgEVKKGLIHARL...PNPDLPTALEVLTTGKaSWMPDL.G..YIQ..PPPLNAK 258- 311 (36.33/14.65) EILKsLENLNTLLSIRLNLHDYDS.....IPFHFKNFEIKSGRVTFKVAGEFEID.LTIA...................................................................................................................................................... 389- 576 (202.10/128.81) ETLK.VEALNRALSVQYWLDRYPKglrswIILGVHSGKRKDGRPDPKATSRLFIRwFRDSkeVPDVDVQFDTVNITT......ESLLKTViaKHVSYIlTSIHDNLaAKPLFANrelalSLS.....ISSTepaeSELKVQLTNE.QHL........TVKIEPISGRIlfsPASQLNTKCESQLNGK.SPNPAIdGhsYIEvlRGQLLAE --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 77.76| 22| 33| 24| 46| 3 --------------------------------------------------------------------------- 24- 46 (37.06/30.53) NGVNGaNYAPEKSPEKGKGRAEP 59- 80 (40.69/28.45) NGVNG.NFLDASQQQNGLGDSIP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 106.82| 30| 35| 963| 995| 4 --------------------------------------------------------------------------- 966- 995 (56.69/37.37) ETAWTPAPDTEKGEVFVNVRAVD......WYMIRYD 998- 1033 (50.13/25.22) QTASTPDSPPTMRKIMFEVRLRHrrgepwWYVRRSD --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 60.66| 19| 33| 911| 933| 5 --------------------------------------------------------------------------- 911- 933 (28.47/29.33) FNAMETSMTLVLerhnPHLRILD 945- 963 (32.19/20.62) LNDVASLLPLTL....PVLRGLD --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) LKREVVEI 2) LSKQVR | 1146 1111 | 1153 1116 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab