Description | Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MPGVIMENGRNGSHTNHDRDQRPNGINGANHVPEKNQEKGKGKAEPQQNMTPISPTISNGLNGNFMDGQRHQNGGTDAVSENLQERLNQLPPEIVHITQGYMPLSKLLSRLAQKTHSDLSSTILELAQMPIPASALNGNSSHVTTVDDNSPENLAKKLRMLKFAQDAHTEWTKALVITGWSRRAEDVSRTIDLKIHLDNQMGFYDSAFSELAEVKRGLIHARLPNPDLRTALEVLTTGKASWMPDLGYIQPPPLTAKEILKSLENLNTLLTIRLNLHDYNSIPLQFKDFAIKSGRVTFKVAGEFEIDLTIADEDPETQFWFIDFRFMFWPSVSTLAPQLRFHIESKVNEALAKDGLAGCYKYLHEMVLTHKISQFRKQAMDLARAKWIDTLKVEALNRALSIQYWLDRYGAKGPRSWIILGVHSGKRKDGRPDPKATSRLFIRWFRDSKEVPDIDVHFDTVNINTQSLLKTVIAKHVSHALTSIHDNLAAQPLFANRELALSLSISLTEPAESALKVQLTSEQYLTVKIEPISGRFVFSPASRLTAEWENRLNLQTMNPANDGHTYIERLRTQLLAEEIISRGQSVGWMVIRNPGLKADVLQPYFPRNTQPQTLWFRRPGWLDDWCVAVIMSPGGEQWLLFETADAPTTLSSSNITPSRRITSSIKIPSKLASPVPTYEFLSTLNIFAAALVSHYCNLRALHGKRAVHILRKGRPSKAVTLPSIYVRLSELLVSKGKSARTGNPWAKDVIRLTFQGLELVPQKSADANAPIPENQAQAPGDLVSRRPTPQETAVMISEARMIVSQSSEASVLVNINEKVDKDIAFDPNSGSFAFRLRSQVGGSVIPDLVERLVRVERLVEFVQVLQKHEKTLKCETVSLGKIVFTYGNASASREFDGMDLDTTSHPYKATVDFSAMENNMTLVLERENPHLRIADYLAKVLNGPEGLDGVATFLPLTLPVLRGLDAMESAWTLAPDTEKGELFINVRAMDWYMIRYNVKQPSPTADSPPTLRKIMFEVRLRHRRGDPWWYVRRSDTITRSSKETDDIDDALKAVWNSKGSGWQGMRVSGVAQVSGVEELLGKLDEVMRNLPVASS |
Length | 1095 |
Position | Tail |
Organism | Pezoloma ericae |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Leotiomycetes> Helotiales> Hyaloscyphaceae> Hyaloscypha. |
Aromaticity | 0.07 |
Grand average of hydropathy | -0.343 |
Instability index | 41.92 |
Isoelectric point | 8.78 |
Molecular weight | 122664.61 |
Publications |
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082 |
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP17696 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 116.25| 34| 36| 24| 57| 1 --------------------------------------------------------------------------- 24- 57 (60.46/39.38) NGINGANHVPEKNQEKGKGKAEP..QQNMTPISPTI 59- 94 (55.80/35.75) NGLNGNFMDGQRHQNGGTDAVSEnlQERLNQLPPEI --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 82.41| 24| 36| 588| 614| 2 --------------------------------------------------------------------------- 588- 614 (41.02/33.69) W..MVIRNPGLKADVLqpyFPRNTQPQTL 625- 650 (41.38/24.50) WcvAVIMSPGGEQWLL...FETADAPTTL --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 70.50| 21| 35| 975| 995| 3 --------------------------------------------------------------------------- 975- 995 (39.85/25.81) PDTEKGELF.INVRAMD....WYMIR 1008- 1033 (30.65/18.14) PPTLRKIMFeVRLRHRRgdpwWYVRR --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 48.14| 14| 28| 688| 701| 4 --------------------------------------------------------------------------- 688- 701 (24.71/15.89) AAALVSHYCNLRAL 718- 731 (23.43/14.72) AVTLPSIYVRLSEL --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 85.99| 27| 28| 235| 262| 6 --------------------------------------------------------------------------- 235- 262 (44.39/28.70) LTTGKASWMPDLGYiQPPPLTAKEI.LKS 266- 293 (41.60/22.50) LNTLLTIRLNLHDY.NSIPLQFKDFaIKS --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 215.64| 63| 590| 294| 387| 7 --------------------------------------------------------------------------- 320- 387 (101.73/108.38) WF........IDFRFMFwPSVSTLAPQLRFHIESKVNEAL.A..KDGLAGCYKYLH.EMVLTHKISqFRK.QAMDLArakW 444- 506 (61.96/23.32) WFrdskevpdIDVHFDT.VNINTQS.LLKTVIAKHVSHAL.TsiHDNLAAQPLFANrELALSLSIS............... 929- 971 (51.95/20.13) .........................PHLR..IADYLAKVLnG..PEGLDGVATFLP....LTLPV..LRGlDAMESA...W --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 118.16| 36| 358| 526| 566| 8 --------------------------------------------------------------------------- 526- 566 (58.34/43.57) TVKIEPIS.GRFVFSPASRLTAEWENRLNLQTMNpandgHTY 871- 907 (59.82/33.56) TLKCETVSlGKIVFTYGNASASREFDGMDLDTTS.....HPY --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) GDPWWYVRR 2) IMFEVRL 3) RLFIRWF | 1025 1014 439 | 1033 1020 445 |
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