<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP17695
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MPMLMEDEMDMDNMEDLFGDGAGLSLPSRPPSKELYQRLDELRASGCCQGIAWSKWGSIAAIASNGAALELRNLRCHPENGTWALSEPTVTPNFSSALDGGPLKHLSWSPTGSDLAVIDAAGRITILAVFSSLNKPSLNRSCGSDPADDLHEVVGCFWLNIATYPPNRPVVLHGPGVKDGSNYRYEAQQGPILGPCHPSPSKSAFVCLTTNGLLRLLWPQNTGKWCESHSELESIVSSDDLITHAAICPDKGGYLLIAFATTSKQLRTVRAFIDWNPTKIDKVSPAQWPLNPTIKTMHIAVTSWAPDISSDTANSSHTESSMVHLSHLEFLPPCGDAAGRMAPPTILAVRSHLPASPSHYNQDVHTTVDRWEVREKPQTIHPAFEQLSSRRNSVGSQPRSVNYLKRSESFTVNKIIVALDTMNLGKVLFFAYADGSVEYRDRLTMAETFNDGDLDRVWHLSQIGFSYPGDEPCLQVALSPSYCSLVQIRNDGKIKWKHLDYQLGDIGTNMEDGLYAGVVASLSLSCASAIMRNVNYDDLLATANKFATAQFAYDWLFELSRILRVNMDYSEESHHDVLVRNTTIQLCLCIQNSLGFKGEFNPRTFSGKFAWLVLQLRNIVVLVTMAANLNVPQGGPNSDKTSPLEDPEVINSLAGSVRWVLDFLAWLTDTLLTLPSTLPPTIDLTKASNLPLPELLAHLHSTNTISLHLLLSSPTRGFLTAICRRLQHLDYIARKAIMYPGVNNTPNPQNSNPNQHQSTAPSPALRAAYMQIATLTSNTILRIKTMETLLGSLGSLIKTAYASNNPPLSGSQPAEKARNALEIKMLFGGSFPDAFKSVIVELFKEEGLLDAVKAEIEPALLFFADFTMLEVDEDPVSVAKRKALGKTMDCFQKRWLVNPEKKAAAASTTATTAGTERNPQQGNAGSGLVPAQDGSVVGSGGLMGAGGRQGARWRRCARCAAVMEDVLTQRSALQWLVMQQRRCFCSGYWDTLAPGETVA |
Length | 999 |
Position | Tail |
Organism | Pezoloma ericae |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Leotiomycetes>
Helotiales> Hyaloscyphaceae> Hyaloscypha.
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Aromaticity | 0.07 |
Grand average of hydropathy | -0.167 |
Instability index | 46.23 |
Isoelectric point | 6.14 |
Molecular weight | 109221.12 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP17695
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 73.99| 23| 113| 670| 714| 1
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343- 367 (36.05/ 9.33) PPTI.LAVRSHLPAsPSHYNQdVHTT
679- 702 (37.93/33.54) PPTIdLTKASNLPL.PELLAH.LHST
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
6| 345.35| 54| 115| 76| 129| 3
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20- 66 (38.51/17.69) ....DGA.GLSLPSRPPSkeLYQRLDelraSG..CCQG.IAWSKWGS.I.AAIASNG.......
76- 129 (91.67/52.94) CHPENGTWALSEPTVTPN..FSSALD....GG..PLKH.LSWSPTGSDL.AVIDAAGRITILAV
158- 194 (29.85/11.95) .......W.LNIATYPPN..RPVVLH....GP..GVKDgSNYRYEAQQG.PILG..........
196- 247 (69.92/38.52) CHPSPSKSAFVCLT.TNG..LLRLL......W..PQNT.GKWCESHSELeSIVSSDDLITHAAI
248- 293 (64.43/34.88) C.PDKGGYLLIAFATTSK..QLRTVR....A......F.IDWNPT..KI.DKVSPAQW.PLNPT
297- 341 (50.98/25.96) MHIAVTSWAPDISSDTAN...SSHTE....SSmvHLSH.LEFLPPCG......DAAGRM.....
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 73.00| 23| 112| 540| 563| 6
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540- 562 (40.01/27.51) LATANKFATAQFA..YDWL.FELSRI
594- 619 (32.99/16.61) LGFKGEFNPRTFSgkFAWLvLQLRNI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 120.29| 46| 420| 395| 453| 7
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395- 453 (62.95/92.02) GSQP..RSVNYLKRSESF......TVNKIIVALdTMNLG...........KVLFFAyadgsveyrdRLTMAETfnDGD
810- 874 (57.34/46.05) GSQPaeKARNALEIKMLFggsfpdAFKSVIVEL.FKEEGlldavkaeiepALLFFA..........DFTMLEV..DED
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