<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP17667

Description Uncharacterized protein
SequenceMNNKTIAVAIDRDKGSQSALKWAVDNLVGKGQIVYLVHVKLKQKPNKSTDFSNDSFLINTDVQLKELFLPFRCFCTRKEIKSQEVVLEDTDVVKGLVDFATHSIIEVLVIGAPSKGGILKRFKTRDAPSTILKGAPDFCTVYVISKGKISATKAASRLPPFISPLHTHIPPEPSTAPAKVSTDKILPIKAMPGPRKSVDLSFPRQSMESPFSTFSNDSNTIKSPFTNRKGPNGKPYGELLPPDLDISFVSAGRPSADNVLFDSDIVGANSRISFSELENPGYDSYNLGRKSVDVISANDMSYSTFDSPRTSLSNNEDVEAEMRRLKQELTKTMEMYSTACKEALTAKQKAMELQKWKLEEQQKIEEARVTEESTTGVAEKENAAESTQRYDARYRRYTIDEIEEATEYFSAARRIGEGGYGPVYKCHLDHTPVAVKVLRPDAAQGKSQFQQEVEVLCCIRHPHMVLLLGACPEYGCLVYEYMSNGSLEDCLLRKNKTPPLSWQHRFRIAAEICSGLLFLHQTKPEPIVHRDLKPANILLDRNFVSKIADVGLARLVPPSIADSVTQYHMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGVMLLQIITARPPMGLSHHVERAIEKGTFAEILDPVVTDWPVEEALGFAKLSLGCVELRRKDRPDLGKVVMPHLQRLRLLADDDTM
Length684
PositionTail
OrganismLactuca sativa (Garden lettuce)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> campanulids> Asterales> Asteraceae> Cichorioideae> Cichorieae> Lactucinae> Lactuca.
Aromaticity0.07
Grand average of hydropathy-0.323
Instability index44.92
Isoelectric point6.95
Molecular weight76135.36
Publications
PubMed=28401891

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP17667
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     120.07|      37|     162|     472|     511|       1
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  472-  511 (64.61/51.92)	PEYGCLVYEYMSNGSLEdclLRKNKTPPLS...WQH..RFRIAAE
  639-  680 (55.46/35.61)	PVEEALGFAKLSLGCVE...LRRKDRPDLGkvvMPHlqRLRLLAD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      38.05|      12|     157|      51|      68|       2
---------------------------------------------------------------------------
   51-   68 (13.26/30.90)	FSNDSfliNTdvqLKELF
  214-  225 (24.79/19.80)	FSNDS...NT...IKSPF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     127.71|      40|      61|      74|     115|       3
---------------------------------------------------------------------------
   74-  115 (61.59/43.40)	FCTRKEIKSQEVvlEDTDVVKGLVDFAT..HSIIEVLVIGAPSK
  138-  179 (66.12/41.01)	FCTVYVISKGKI..SATKAASRLPPFISplHTHIPPEPSTAPAK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      69.11|      23|     299|     279|     319|       5
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  254-  277 (35.55/15.10)	PSAD..NVLFDS.DIVGANSrISFSEL
  280-  305 (33.56/38.22)	PGYDsyNLGRKSvDVISAND.MSYSTF
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP17667 with Med32 domain of Kingdom Viridiplantae
Unable to open file!