Description | Uncharacterized protein |
Sequence | MMNSGSTGSERAADLYNEPDMDIETWVNELYTDEFRDSLMNLGFDDIIINPDYASDQPNMSVNSRSIFGGGSADKSQRGIPEERMTVSSLTPNSSTPTLQTSGHILSPLPTFVSNPASQSSPSHTTQDLPQFTNQNQPLKQQIFEHTAVQQPPTHPSMTQSTIMFGQQKTNQQMASDHLRPCPRPVSTIKKIHLQNLQTPMQQISNTSQVQKRQKQMVVHPLQNFQQNQNQTQQPAVMTPHILMPEGGQHRVHGLLIGSEGQKKPQGHISTALPATAGFSHPNEFSTNENWRECAFRQETNVEIATKYGHAKVFLEKMINFLNIATIDKIPKNRERVYNYMNFIINYLTSFRIKNGGSSPIFDQMINQAPEDHSQSKGSYLQPSGGDMRLPYNLQENLNHGVINLEQNILNFNQQRLHQPVDIQKGNGDMRLQNMPPPNSSQGINLATREAEMMKFNQYFPSRRPEGRITSTLISNDSYQMGSVNPLLTGSFKSTQPTVLGTTQRSNLGPRPSSVNVSTSSMSLLRAATAANFPSRQVNHQPSLVNQSFNSEKMKQPMQKSNHEMITGSNQGQVLSPLAALLQNQFPSQPAPNPIILQPSGQHSVSSWQVNANNVLSPQSIACSPFLLGSSSAPSRREKHHSSSGPASVSNTEGQRQEIPIIAGMFKNQKTMNNKVSDMDHPKTPTASPPMDTTPCTEKAAVSEDSKDPVVHLTETVESLPSKTVGSSMNDITIVEQDHHSVPAYPEPAKPVGGNTEPIFDEELVNLDHLNIGEETAFLFAPENVPQQKVKRKFTSASHSSQDFGDFDSIDQFFSEEWDSDSTVPSMKKKSKIECTNLAISEEIKEINKKLLETSSEMVANYPVEDSNSILEGHEGIKVTLVYRNVCIPDLFRNQAGVTSKMRPEFRIKLLVPLNYPASSPTILKGSHDNVSSEPWPQLYEEMVSKFHCAIRELPEPMSLGDMARKWDACARSVITDFVQGIGGKSFSIKYGSWESSSVSK |
Length | 1001 |
Position | Tail |
Organism | Lactuca sativa (Garden lettuce) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> campanulids> Asterales> Asteraceae> Cichorioideae> Cichorieae> Lactucinae> Lactuca. |
Aromaticity | 0.06 |
Grand average of hydropathy | -0.638 |
Instability index | 57.61 |
Isoelectric point | 6.22 |
Molecular weight | 111095.26 |
Publications | PubMed=28401891 |
Annotated function |
|
GO - Cellular Component | |
GO - Biological Function | chromatin DNA binding GO:0031490 IBA:GO_Central transcription coactivator activity GO:0003713 IEA:InterPro |
GO - Biological Process |
Binary Interactions |
Repeats | >MDP17646 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 5| 626.55| 136| 136| 384| 519| 1 --------------------------------------------------------------------------- 77- 152 (46.37/17.27) .......................................................QRGIPEERMTvS.SLTP.....NSST........................PT...LQTSGHILSplpTFVSNPASQSSPSHttqdlpqftnqnqPLKQQIFEHT.......AVQQ.......P......... 156- 291 (159.81/79.10) .......PSMTQ..STIMFGQQKTNQ..QMAS..D........HLRPCPRPVS.TIK...KIHLQ.N.LQTPmqqisNTSQ...VQKRQKQMVvhplqNF.QQNQNQ...TQQPAVMTP...HILMPEGGQH.RVH.............GLLIGSEGQKKPQgHISTALPATAGfshPNEFSTNENW 292- 382 (58.95/24.12) RECAFRQETNVEiaTKYGHAKVFLEKmiNFLN..IatidkipkNRERVYNYMNfIINYLTSFRIK.NgGSSP.....IFDQMINQAPEDHSQS.....K..GSYLQ................................................................................. 384- 519 (231.04/117.92) SGGDMRLPYNLQ..ENLNHGVINLEQ..NILN..F........NQQRLHQPVD.IQKGNGDMRLQ.N.MPPP.....NSSQGINLATREAEMM.....KF.NQYFPS...RRPEGRITS...TLISNDSYQMGSVN.............PLLTGSFKSTQPT.VLGTTQRSNLG...PRPSSVNVST 528- 649 (130.38/63.05) ATA...........ANFPSRQVNHQP..SLVNqsF........NSEKMKQP...MQKSNHEM........IT.....GSNQGQVLSPLAALLQ....nQFpSQPAPNpiiLQPSGQ........HSVSSWQVNANN...vlspqsiacsPFLLGS..SSAP....SRREKHHSS...SGPASV.... --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 183.33| 57| 172| 743| 822| 2 --------------------------------------------------------------------------- 758- 822 (91.55/83.69) PIFDEELVNLDHLNIGEetaflfAPENVPQQKVKRKFTSASHSS.QDFgdFDSI.DQFFSEE...WDSDS 937- 998 (91.78/43.07) PQLYEEMVSKFHCAIRE......LPEPMSLGDMARKWDACARSViTDF..VQGIgGKSFSIKygsWESSS --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 86.47| 21| 136| 696| 721| 3 --------------------------------------------------------------------------- 696- 716 (34.24/16.75) CTEKAAVSEDSKDPVVHLTET 835- 854 (31.73/14.58) CT.NLAISEEIKEINKKLLET 864- 881 (20.51/18.40) VEDSNSILEGHEGIKVTL... --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 64.36| 19| 60| 672| 690| 4 --------------------------------------------------------------------------- 672- 690 (36.99/18.16) MNN.KVSDMDH...PKTPTASPP 729- 751 (27.37/11.67) MNDiTIVEQDHhsvPAYPEPAKP --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) AADLY 2) IKKIHL | 12 189 | 16 194 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab