<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP17612

Description Uncharacterized protein
SequenceMKGKLGKNLWGEELVILAEASMEPTVIYVKQVLDIISKASNKGIKGIAHIPGGGFIDTICRVFGIGLGALVYNDSCSVPPVFKWIQKAGGIEDGEMKRTFNMGIRMVLVVSKEVSERVVKEEGEMVYRVGEVFSDSPRDSVQFIECSPSSCPRALPGEVRKYGTTIAPGLYAPVHQHFFVARMDMAVDCKPGEAYTQVEADVKVEEPGKDNVHNNTFYTQETLNHKQCGIVIRYLLAIGSVDESE
Length245
PositionTail
OrganismLactuca sativa (Garden lettuce)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> campanulids> Asterales> Asteraceae> Cichorioideae> Cichorieae> Lactucinae> Lactuca.
Aromaticity0.08
Grand average of hydropathy-0.092
Instability index37.66
Isoelectric point5.65
Molecular weight26931.73
Publications
PubMed=28401891

Function

Annotated function 
GO - Cellular Component
cytosol	GO:0005829	IBA:GO_Central

GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
copper ion binding	GO:0005507	IEA:InterPro
phosphoribosylamine-glycine ligase activity	GO:0004637	IBA:GO_Central
phosphoribosylformylglycinamidine cyclo-ligase activity	GO:0004641	IBA:GO_Central
primary amine oxidase activity	GO:0008131	IEA:InterPro
quinone binding	GO:0048038	IEA:InterPro

GO - Biological Process
'de novo' IMP biosynthetic process	GO:0006189	IEA:UniProtKB-UniPathway
adenine biosynthetic process	GO:0046084	IBA:GO_Central
amine metabolic process	GO:0009308	IEA:InterPro
purine nucleotide biosynthetic process	GO:0006164	IBA:GO_Central









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP17612
No repeats found
No repeats found




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP17612 with Med16 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




NANANA









Molecular Recognition Features






MoRF SequenceStartStop




NANANA