<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP17611
Description |
Mediator of RNA polymerase II transcription subunit 17 |
Sequence | MDGNLSISLDKLPVKRLEIIEENGAEKFPPDLSYDDNRVNQIRRIDFAWAVEREDPNKKQKKGDSTASSSKDTTSSSPWPWQNMVENLKLAHQELSVIIDLINTVEINDAVTVAGMTRPKQLPNELLSDLAVSTATKLQCFRHLGKYFKQSAKALEKQVAKEARFYGALIRLQQNWKVKRHRMAASAAGNEGFYIDLFDNTLYDPTAIFRQSSMSTIRVEHDNAGMLALNLPSKACHVLQFGFVGDDIPKKSNGRTTNLSNSEFSEETKKEDETDNDDDDGVKKRHSDLREVHRAVFNEQVFNLINQEAFVPSLGVNVTGIRENHLQLNIDQEASVFISLVSSTQEHDATDDEENNDNNALIPLIDGEEEKQPVKKRSFLPNRISSEILLKQLFHEHVFVRAKNRSASPNKSQQFGQLTKDGSKSNLLGHFCMSLAHRIFSYKVLTQLENLAKSVSYVSLVSHPTWTSRTSSWTLVVDVPPSILHSGHQTWAAKKRGKSQFHTKVVVIDDCINIEGEGAPNVVGLFKGKCENSCSINRYDCNLADLHVILLQQVASQIIRWLHEEALSVGMKASRDFLSLCFEVEQGEVVGVVAHVDPEDGEGGISWWLVVGNGGGVEEYKVEREDSDGETKRYLGHLSLDVLYATLLDLLTMCSNGGSLKSSLDNQL |
Length | 668 |
Position | Head |
Organism | Lactuca sativa (Garden lettuce) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
asterids> campanulids> Asterales> Asteraceae> Cichorioideae> Cichorieae>
Lactucinae> Lactuca.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.442 |
Instability index | 42.40 |
Isoelectric point | 5.66 |
Molecular weight | 74718.17 |
Publications | PubMed=28401891
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364140
|
GO - Cellular Component | core mediator complex GO:0070847 IBA:GO_Central
mediator complex GO:0016592 IBA:GO_Central
|
GO - Biological Function | transcription coregulator activity GO:0003712 IBA:GO_Central
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IBA:GO_Central
|
Interaction
Repeat regions
Repeats |
>MDP17611
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 72.21| 20| 131| 458| 477| 5
---------------------------------------------------------------------------
458- 477 (37.79/24.29) VSLVSH..PTWTSRTSSWTLVV
590- 611 (34.42/21.48) VGVVAHvdPEDGEGGISWWLVV
---------------------------------------------------------------------------
|