<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP17567
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MPLMMEDDGINMEDLFGQTGSFDMPPPSHPPNKALSHRLDEMRLSGCCQKIAWSRQGCVAYVSADATKVNLRYLHCQPADGKWDLSDDNPSTLPMETLPGHVVVHLSWNELGSDLAVIESSGRVSIFSIGIALNSVNAYRPAVDPDDDSAQVVGMMWLNSQRSVHAFNQAAKVQGRWAYSPFRRRPIGPFSPVHKSALVCVTKSGVIKFLYQSPDNRWGEISAELKNTSYSDRLLTHAALSSTQGGVLLVTHSVCQKICFYRVHINWTPPQYDSAQLKQVPVQFPAPTFRFSHVKVETPGGVPGPLHGEHDRSDHLCPIPSALYCLTRLDIILAAQDNAAGSTTNPWIVAIYSIPPHAASGLPQQSRPSTVIVRWQLDSAPHGLHPKFDEVASKKGPVQNKPKAVLRRLEDIQTDRYPISVDPTEYGNVVTVTFDDGSVAFYDPKTMSPFSGVDDANTVTSLAQAGFHYPLDPASGLHIDFSPSGCLAATLNGDGQVQLRGMEHSYGVENEGYDENKFSAAVAALTLAFSRGCGSEVNTDDIIMLARRQLSPDAQVSLVTEVYRALPINCDYTQEHEKQEKLMSNTYIPRCLSLQAALGFKDQFTSRSLASAIPWAILQIRHAAILYPFLFQYSKGVQGEPHDPDVLRTVLGNTKWALDFSHYLLNELFELADELESVASDPETLSQKLKSTASLPLIILLSSMSRAYLRIICRGLRGIYTGYANAAFTGDSRIYYTEIRQTLDASPVRVDVYEKFVAGIDSAVRHAYHGAGFGDAERPGPEKELLVNARIPPVLVTAVGTIFRQTLGVIKPEVDRLAIYMADYSWLGVGGDRRADVWRREREIDIVRKMPLRVTSAAAAAAAAASQVNNNGGVNQQQNQQQQQQPPRRRRCVRCCGLSDGSNPLRTGPIGYRLIHRLGYVRQCVCGGLWALEVEPVSLSG |
Length | 941 |
Position | Tail |
Organism | Aspergillus taichungensis |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes>
Eurotiomycetidae> Eurotiales> Aspergillaceae> Aspergillus.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.228 |
Instability index | 44.92 |
Isoelectric point | 6.54 |
Molecular weight | 103520.23 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP17567
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 117.13| 43| 56| 445| 499| 1
---------------------------------------------------------------------------
445- 499 (59.54/61.70) KTMSPFSGVD....DANTVtSLAQAgfhypldpasGLHIDFSpSGC...........LA.ATLNGDGQVQL
500- 558 (57.59/31.78) RGMEHSYGVEnegyDENKF.SAAVA..........ALTLAFS.RGCgsevntddiimLArRQLSPDAQVSL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 91.90| 26| 59| 84| 110| 4
---------------------------------------------------------------------------
84- 110 (43.92/34.09) DLSDDNPSTLPMETLPGHVVVHlSWNE
144- 169 (47.98/32.53) DPDDDSAQVVGMMWLNSQRSVH.AFNQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 99.85| 30| 38| 615| 651| 7
---------------------------------------------------------------------------
615- 647 (47.89/47.92) WAiLQIRHaaILYPFLFQYSKGVQGEPHDPDVL
656- 685 (51.96/30.06) WA.LDFSH..YLLNELFELADELESVASDPETL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 73.13| 23| 38| 376| 398| 8
---------------------------------------------------------------------------
376- 398 (41.41/23.86) QLDSAPHGLHP.KFDEVAS...KKGPV
413- 439 (31.72/16.67) QTDRYPISVDPtEYGNVVTvtfDDGSV
---------------------------------------------------------------------------
|