<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP17564

Description Uncharacterized protein
SequenceMNNPANFNNVGAGLPAGAKPHPQIPVPPKVENGQTVMNFVAQALQSQGNFSGWRQEVPLRDRAVKVYQMITSLRLIKPQIDIAGAAHAALTFEQGAFSRAREKVDYDKECNDKLVHIRDTRARQAAVFQNGMMNQASPTPGAPSVGQFPQQANRPMQASPVAGPQQPMMGMNDPLQSTARPHRPPSQQPPQSAPPAQTPQGMLLQQQQAQAQAQAQPQQTPQPQQTPQSAQRPPQRPGGAIALADDFNALPANELDAVNRLAKEIFHRTAKEDLDKIKMNLANMNPTQKQYLHQRGMDPLSYFFRCQALAQFRKMRRGHMNRNPNAPVDPNGALMAGDPMMNRQMFQNMMNNQRNPAFAAAAAAAAVNNPQGLDTSFMGNVENIQGQQADGLRSQEAGQLVVPASSNQAPFNAAQNMFPPGQYAPGAPGAPAAMNGAAMSPQFLAQQQQQQQQQQQQQQQQQQQQQQQQQQQHLQNAPSAPPPDRTPQSTGAFPASAPAPAPAPAQTSAQAQARAQAAQKAQMAISQGQANAHGLPQMPPQGSPMSMLNRPMPQGQMSPAQMAAQIRPPSRPPGMNSQPPTAQSLGGPPVMQGRPQLAGLSAAAQEQLNQMTPEQFNAFLISQQQRRALANNQALARANAAQHMGMPQNLSQPGGPGQPMINNGQVGNPQNMRTALGLPPQFAGMNAAQPPGQMMPGPQVPLPQRHPQQPQPQPQPHPHPHPQQQQQQQQQQQQQQQQQHQQQQQQQQQQQQQQQQQQLQQRQQELYKLQLLRSQSGAIEMSPEQVREMDRLPFPPSLLNSSQNLAAAVPKTLKTWGQLKQWATQNPQILGAVEMQKLIGLQKMHLAQMLAQGKDRNPEQGVPGPWMAMGAQGQQAPPFTNQPPQSFPAGPQQQHPMNMPAMRPITAADIQITRHRLGPRAQAFSDEQLRGILQQNRHKQLLQMAQDRAALAKQQQTPHAQTSLPPQPPQQPPQQQQPQPSPITAAANAVPVKAEPSTPVSVPPPHQPHPAAKPQPVAATKGAKGAGAGAKAGSKRKSPPDEPAEGSKPGQPAAAPGAAAPVSSKVGLPLSREQLAAMNPAQRAQLDAQLRRQTGRSPIPRSVAEESWNNIPDKAKQLYNEMLNQPHPTEPVNLTPADKNKMAQTLRDSTDLLARMDTLVVWFSKLPPSQGNNLKTLLQMRMQLMRQFKPGDDWTLNDHFTIPPNYLEQAIAYTRKFFSVMVARMNQHQNQVAGQRSGAPSGATPTQPTAQNTMPALNASNLQQLQQQEEALQRARRASSQTSVAVNTAVPPAPFGAPSPQGVPHAYGPASNPPQELKLPPQKKRKQAHAATTVPSAAAAAAAKAHASKSGAGDVTLIGAFRCEVAECPYHSQGFPTQQALDYHVAESHQAEEPIDDPLEFALESFRIGLTKEDKAEGAEAKVGAALPMDTPQLSSKQEAVTPATLGATPMGRPPSQFGAKGTSPASSQQLTPRGPAAKGLAAATPKAAAGKEGKKEPGKSTDPTPATDPWATSAISLEAIQDAFMDLGDDGGMGLGPMEEFLNADMFAPPHSKDTPDSVETGVVTQTPKDTELPKTDDLTGKMIDAVDDQWMDWPLGSTTLDDGMCVSQSWNEIDWEMMDRQDGGLGMDDTRIAIRTL
Length1639
PositionTail
OrganismAspergillus taichungensis
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes> Eurotiomycetidae> Eurotiales> Aspergillaceae> Aspergillus.
Aromaticity0.04
Grand average of hydropathy-0.782
Instability index63.78
Isoelectric point9.45
Molecular weight176879.10
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP17564
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|    1805.14|     283|     284|     351|     633|       1
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   14-  199 (148.89/19.85)	.........................................................................................................................L.PAGAKPHPQ.IPV...PPKVENG....QTVMNFVAQALQSQGNFSG..WRQEV...................PLRDRAV.KVYQMiTSLR....LIKPQ..........................idIAGAAHAALTFE.QG...A.....FS...RAREKVDY.DKecND......KLvhiR..DT.....RARQAAVFQNGmmNQAsPTPGAPS........VgqFPqqanrPM....QASPV.AgPQQPmMGMNDP.LQStarPHRPPS................QQPPQSA.....PPAQTP
  200-  459 (394.77/66.15)	QgmllQQQQAQAQAQAQPQQ.........TPQPQQTPQ......SAQR..P....PQRPGG..AIALADDfNALPANELDAVNRLAKEIFHRTAKedldkiKMNLANMNPT.QKQYLHQRGMdPLSYFFRCQ.ALAQFRKM.RRGH....MN.RNPNA......PV.....DPN.....................GALMAG....DPM..........M...NR....QMFQNMM.....NNQRNPAF..AAAAAAAAVNNP.QGLDTS.....FM...GNVENIQG.QQ..AD......GL...R..SQ.....EAGQLVVPASS..NQA.PFNAAQN........M..FP.....PG....QYAPG.A.PGAP.AAMNGA.AMS...PQFLAQ................QQQQQQQ.....QQQQQQ
  460-  726 (435.64/73.85)	Q....QQQQQQQQQQQQHLQNA.....PSAPPPDRTPQ......STGAF.P....ASAPAP..APAPAQT.SAQAQARAQAAQKAQMAISQGQAN......AHGLPQMPPQGSPMSMLNRPM.PQGQMSPAQ.MAAQIRPPSRPPG....MNSQPPTAQSLGGPPVMQG..RPQLA...................GLSAAAQEQLNQM.TPEQFNAFLISQQQR....RALANNQ.....A......L..ARANAAQHMGMP.QNLSQPggpgqPMinnGQVGNPQNmRT..AL......GL...P..PQ.....FAG...........M....NAAQ.............P.....PG....QMMPG...PQVP.L............PQRHPQ................QPQPQPQphphpHPQQQQ
  727-  945 (294.49/47.27)	Q....QQQQQQQQQQQQH.QQQ.....QQQQQQQQQQQ......Q...................QQ.......QLQQRQQELYKLQLLRS..QSG......AIEMS..PEQVREMDRL..PF.PPSLLNSSQnLAAAVPKTLKTWGqlkqWATQNP..QILGAVE.MQ.....KLI...................GLQ...KMHLAQM.........LAQGKDR....................................NPeQGVPGP.....WM...A..MGAQG.QQ..AP......PF...T..NQ.....PPQSF..PAGP..QQQhPMN.MPA........M..RP.....ITaadiQITRH.R.LG.P.RA...Q.AFS..dEQLRGI................LQQNRHK.....QLLQMA
  946- 1238 (299.16/48.15)	Q....DRAALAKQQQTPHAQTSlppqpPQQPPQQQQPQpspitaAANAV.PvkaePSTPVS..VPPPHQP.HPAAKPQPVAATKGAKGAGAG.AK......AGSKRKSPPD.EPAEG.SKP....GQ..PAA.A..........PG......AAAPVS.SKVGLPL..S..REQLA...................AMNPAQRAQL.........DAQLRRQTGRspipRSVAEES....wNN..IPDK..AKQLYNEMLNQP.HP................TEPVNL.TP..ADknkmaqTL...R..DStdllaRMDTLVVWFS....KL.PPSQGNNlktllqmrM..QL.....MR....QF....K.PGDD.WTLNDHfTIP...PNYLEQaiaytrkffsvmvarmNQHQNQV.....AGQRSG
 1258- 1491 (232.20/35.54)	N....ASNLQQLQQQEEALQRA.....RRA.....SSQ......TSVAVnT....AVPPAPfgAPSP.......................QGVPH......AYGPASNPPQE.....LKLP..PQKKRKQAH.AATTV..PSAAAA....AAAKAHASKSGAGDVTLIGafRCEVAecpyhsqgfptqqaldyhvAESHQAEEPIDD...PLEF...............ALESFRigltkEDKAEGAE..AKVGAALPMDTP.Q.LSSK.....QE...AVTPATLG.AT..PM......G....RppSQ.....FGAKGTSPASS...........QQ........L..TP.....RG....PAAKGlA.AATP.KAAAG................................................
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---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.87|      16|      19|    1580|    1597|       2
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 1580- 1597 (28.04/28.50)	LTGKMidAVDDQW..MDWPL
 1602- 1619 (28.83/20.73)	LDDGM..CVSQSWneIDWEM
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP17564 with Med15 domain of Kingdom Fungi
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