<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP17564

Description Uncharacterized protein
SequenceMNNPANFNNVGAGLPAGAKPHPQIPVPPKVENGQTVMNFVAQALQSQGNFSGWRQEVPLRDRAVKVYQMITSLRLIKPQIDIAGAAHAALTFEQGAFSRAREKVDYDKECNDKLVHIRDTRARQAAVFQNGMMNQASPTPGAPSVGQFPQQANRPMQASPVAGPQQPMMGMNDPLQSTARPHRPPSQQPPQSAPPAQTPQGMLLQQQQAQAQAQAQPQQTPQPQQTPQSAQRPPQRPGGAIALADDFNALPANELDAVNRLAKEIFHRTAKEDLDKIKMNLANMNPTQKQYLHQRGMDPLSYFFRCQALAQFRKMRRGHMNRNPNAPVDPNGALMAGDPMMNRQMFQNMMNNQRNPAFAAAAAAAAVNNPQGLDTSFMGNVENIQGQQADGLRSQEAGQLVVPASSNQAPFNAAQNMFPPGQYAPGAPGAPAAMNGAAMSPQFLAQQQQQQQQQQQQQQQQQQQQQQQQQQQHLQNAPSAPPPDRTPQSTGAFPASAPAPAPAPAQTSAQAQARAQAAQKAQMAISQGQANAHGLPQMPPQGSPMSMLNRPMPQGQMSPAQMAAQIRPPSRPPGMNSQPPTAQSLGGPPVMQGRPQLAGLSAAAQEQLNQMTPEQFNAFLISQQQRRALANNQALARANAAQHMGMPQNLSQPGGPGQPMINNGQVGNPQNMRTALGLPPQFAGMNAAQPPGQMMPGPQVPLPQRHPQQPQPQPQPHPHPHPQQQQQQQQQQQQQQQQQHQQQQQQQQQQQQQQQQQQLQQRQQELYKLQLLRSQSGAIEMSPEQVREMDRLPFPPSLLNSSQNLAAAVPKTLKTWGQLKQWATQNPQILGAVEMQKLIGLQKMHLAQMLAQGKDRNPEQGVPGPWMAMGAQGQQAPPFTNQPPQSFPAGPQQQHPMNMPAMRPITAADIQITRHRLGPRAQAFSDEQLRGILQQNRHKQLLQMAQDRAALAKQQQTPHAQTSLPPQPPQQPPQQQQPQPSPITAAANAVPVKAEPSTPVSVPPPHQPHPAAKPQPVAATKGAKGAGAGAKAGSKRKSPPDEPAEGSKPGQPAAAPGAAAPVSSKVGLPLSREQLAAMNPAQRAQLDAQLRRQTGRSPIPRSVAEESWNNIPDKAKQLYNEMLNQPHPTEPVNLTPADKNKMAQTLRDSTDLLARMDTLVVWFSKLPPSQGNNLKTLLQMRMQLMRQFKPGDDWTLNDHFTIPPNYLEQAIAYTRKFFSVMVARMNQHQNQVAGQRSGAPSGATPTQPTAQNTMPALNASNLQQLQQQEEALQRARRASSQTSVAVNTAVPPAPFGAPSPQGVPHAYGPASNPPQELKLPPQKKRKQAHAATTVPSAAAAAAAKAHASKSGAGDVTLIGAFRCEVAECPYHSQGFPTQQALDYHVAESHQAEEPIDDPLEFALESFRIGLTKEDKAEGAEAKVGAALPMDTPQLSSKQEAVTPATLGATPMGRPPSQFGAKGTSPASSQQLTPRGPAAKGLAAATPKAAAGKEGKKEPGKSTDPTPATDPWATSAISLEAIQDAFMDLGDDGGMGLGPMEEFLNADMFAPPHSKDTPDSVETGVVTQTPKDTELPKTDDLTGKMIDAVDDQWMDWPLGSTTLDDGMCVSQSWNEIDWEMMDRQDGGLGMDDTRIAIRTL
Length1639
PositionTail
OrganismAspergillus taichungensis
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes> Eurotiomycetidae> Eurotiales> Aspergillaceae> Aspergillus.
Aromaticity0.04
Grand average of hydropathy-0.782
Instability index63.78
Isoelectric point9.45
Molecular weight176879.10
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP17564
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|    1805.14|     283|     284|     351|     633|       1
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   14-  199 (148.89/19.85)	.........................................................................................................................L.PAGAKPHPQ.IPV...PPKVENG....QTVMNFVAQALQSQGNFSG..WRQEV...................PLRDRAV.KVYQMiTSLR....LIKPQ..........................idIAGAAHAALTFE.QG...A.....FS...RAREKVDY.DKecND......KLvhiR..DT.....RARQAAVFQNGmmNQAsPTPGAPS........VgqFPqqanrPM....QASPV.AgPQQPmMGMNDP.LQStarPHRPPS................QQPPQSA.....PPAQTP
  200-  459 (394.77/66.15)	QgmllQQQQAQAQAQAQPQQ.........TPQPQQTPQ......SAQR..P....PQRPGG..AIALADDfNALPANELDAVNRLAKEIFHRTAKedldkiKMNLANMNPT.QKQYLHQRGMdPLSYFFRCQ.ALAQFRKM.RRGH....MN.RNPNA......PV.....DPN.....................GALMAG....DPM..........M...NR....QMFQNMM.....NNQRNPAF..AAAAAAAAVNNP.QGLDTS.....FM...GNVENIQG.QQ..AD......GL...R..SQ.....EAGQLVVPASS..NQA.PFNAAQN........M..FP.....PG....QYAPG.A.PGAP.AAMNGA.AMS...PQFLAQ................QQQQQQQ.....QQQQQQ
  460-  726 (435.64/73.85)	Q....QQQQQQQQQQQQHLQNA.....PSAPPPDRTPQ......STGAF.P....ASAPAP..APAPAQT.SAQAQARAQAAQKAQMAISQGQAN......AHGLPQMPPQGSPMSMLNRPM.PQGQMSPAQ.MAAQIRPPSRPPG....MNSQPPTAQSLGGPPVMQG..RPQLA...................GLSAAAQEQLNQM.TPEQFNAFLISQQQR....RALANNQ.....A......L..ARANAAQHMGMP.QNLSQPggpgqPMinnGQVGNPQNmRT..AL......GL...P..PQ.....FAG...........M....NAAQ.............P.....PG....QMMPG...PQVP.L............PQRHPQ................QPQPQPQphphpHPQQQQ
  727-  945 (294.49/47.27)	Q....QQQQQQQQQQQQH.QQQ.....QQQQQQQQQQQ......Q...................QQ.......QLQQRQQELYKLQLLRS..QSG......AIEMS..PEQVREMDRL..PF.PPSLLNSSQnLAAAVPKTLKTWGqlkqWATQNP..QILGAVE.MQ.....KLI...................GLQ...KMHLAQM.........LAQGKDR....................................NPeQGVPGP.....WM...A..MGAQG.QQ..AP......PF...T..NQ.....PPQSF..PAGP..QQQhPMN.MPA........M..RP.....ITaadiQITRH.R.LG.P.RA...Q.AFS..dEQLRGI................LQQNRHK.....QLLQMA
  946- 1238 (299.16/48.15)	Q....DRAALAKQQQTPHAQTSlppqpPQQPPQQQQPQpspitaAANAV.PvkaePSTPVS..VPPPHQP.HPAAKPQPVAATKGAKGAGAG.AK......AGSKRKSPPD.EPAEG.SKP....GQ..PAA.A..........PG......AAAPVS.SKVGLPL..S..REQLA...................AMNPAQRAQL.........DAQLRRQTGRspipRSVAEES....wNN..IPDK..AKQLYNEMLNQP.HP................TEPVNL.TP..ADknkmaqTL...R..DStdllaRMDTLVVWFS....KL.PPSQGNNlktllqmrM..QL.....MR....QF....K.PGDD.WTLNDHfTIP...PNYLEQaiaytrkffsvmvarmNQHQNQV.....AGQRSG
 1258- 1491 (232.20/35.54)	N....ASNLQQLQQQEEALQRA.....RRA.....SSQ......TSVAVnT....AVPPAPfgAPSP.......................QGVPH......AYGPASNPPQE.....LKLP..PQKKRKQAH.AATTV..PSAAAA....AAAKAHASKSGAGDVTLIGafRCEVAecpyhsqgfptqqaldyhvAESHQAEEPIDD...PLEF...............ALESFRigltkEDKAEGAE..AKVGAALPMDTP.Q.LSSK.....QE...AVTPATLG.AT..PM......G....RppSQ.....FGAKGTSPASS...........QQ........L..TP.....RG....PAAKGlA.AATP.KAAAG................................................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.87|      16|      19|    1580|    1597|       2
---------------------------------------------------------------------------
 1580- 1597 (28.04/28.50)	LTGKMidAVDDQW..MDWPL
 1602- 1619 (28.83/20.73)	LDDGM..CVSQSWneIDWEM
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP17564 with Med15 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) DKECNDKLVHIRDTRARQAAVFQNGMMNQASPTPGAPSVGQFPQQANRPMQASPVAGPQQPMMGMNDPLQSTARPHRPPSQQPPQSAPPAQTPQGMLLQQQQAQAQAQAQPQQTPQPQQTPQSAQRPPQRPGGAIALADDFNALPANELDAVNRLAKEIFHRTAKEDLDKIKMNLANMNPTQKQYLHQ
2) FRIGLTKEDKAEGAEAKVGAALPMDTPQLSSKQEAVTPATLGATPMGRPPSQFGAKGTSPASSQQLTPRGPAAKGLAAATPKAAAGKEGKKEPGKSTDPTPATDPWATSAI
3) LQLLRSQSGAIEMSPEQVREMDRLPFPPSLLNSSQNLAAAVPKTLKTWGQ
4) MHLAQMLAQGKDRNPEQGVPGPWMAMGAQGQQAPPFTNQPPQSFPAGPQQQHPMNMPAMRPITAADIQITRHRLGPRAQAFSDEQLRGILQQNRHKQLLQMAQDRAALAKQQQTPHAQTSLPPQPPQQPPQQQQPQPSPITAAANAVPVKAEPSTPVSVPPPHQPHPAAKPQPVAATKGAKGAGAGAKAGSKRKSPPDEPAEGSKPGQPAAAPGAAAPVSSKVGLPLSREQLAAMNPAQRAQLDAQLRRQTGRSPIPRSVAEESWNNIPDKAKQLYNEMLNQPHPTEPVNLTPADKNKMAQTLRDS
5) NPQGLDTSFMGNVENIQGQQADGLRSQEAGQLVVPASSNQAPFNAAQNMFPPGQYAPGAPGAPAAMNGAAMSPQFLAQQQQQQQQQQQQQQQQQQQQQQQQQQQHLQNAPSAPPPDRTPQSTGAFPASAPAPAPAPAQTSAQAQARAQAAQKAQMAISQGQANAHGLPQMPPQGSPMSMLNRPMPQGQMSPAQMAAQIRPPSRPPGMNSQPPTAQSLGGPPVMQGRPQLAGLSAAAQEQLNQMTPEQFNAFLISQQQRRALANNQALARANAAQHMGMPQNLSQPGGPGQPMINNGQVGNPQNMRTALGLPPQFAGMNAAQPPGQMMPGPQVPLPQRHPQQPQPQPQPHPHPHPQQQQQQQQQQQQQQQQQHQQQQQQQQQQQQQQQQQQLQQRQQELY
6) QDAFMDLGDDGGMGLGPMEEFLNADMFAPPHSKDTPDSVETGVVTQTPKDTELPKTDDLTGK
7) RKMRRGHMNRNPNAPVDPNGALMAGDPMMNRQMFQNMMNNQR
8) RMNQHQNQVAGQRSGAPSGATPTQPTAQNTMPALNASNLQQLQQQEEALQRARRASSQTSVAVNTAVPPAPFGAPSPQGVPHAYGPASNPPQELKLPPQKKRKQAHAATTVPSAAAAAAAKAHASK
107
1406
769
844
369
1522
313
1224
294
1516
818
1149
767
1583
354
1349










Molecular Recognition Features






MoRF SequenceStartStop




1) AKAGSKRK
2) GLAAATPKAAAGKE
3) KKRKQAHAATTV
1030
1480
1323
1037
1493
1334