Description | mediator of RNA polymerase II transcription subunit 19a isoform X1 |
Sequence | MDPEGKKFGRGPRELTGAVDLISHYKLLPHHEFFCKRSLPLSISDTHYLHNVVGDTEIRKGEGMQLDQLIQNTSYSREPNARIQPFDLDILREAFQLRETAPVDLPLAEKGIPTVAGKSKGESKDKERKHKKHKDRDKDNDKEHKKHKHRHKDRSKDKDKEKKKDRSGHHDSNADQSKKHHEKKRKHDGDEDINDIHRHKKSKHKSSKIDDMGAIKVAG |
Length | 219 |
Position | Head |
Organism | Juglans regia (English walnut) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fagales> Juglandaceae> Juglans. |
Aromaticity | 0.04 |
Grand average of hydropathy | -1.500 |
Instability index | 38.97 |
Isoelectric point | 9.53 |
Molecular weight | 25347.19 |
Publications | PubMed=27145194 |
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IBA:GO_Central |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro transcription factor binding GO:0008134 IBA:GO_Central |
GO - Biological Process | positive regulation of transcription by RNA polymerase II GO:0045944 IBA:GO_Central |
Binary Interactions |
Repeats | >MDP17556 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 4| 97.38| 15| 15| 125| 139| 1 --------------------------------------------------------------------------- 125- 139 (30.34/12.41) DKE.RKH....K.KHKDRDKD 141- 157 (21.12/ 6.44) DKEhKKH....KhRHKDRSKD 159- 173 (25.07/ 9.00) DKE.KKK....D.RSGHHDSN 175- 192 (20.86/ 6.27) DQS.KKHhekkR.KH.DGDED --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) ADQSKKHHEKKRKHDGDEDINDIHRHKKSKHKSSKIDDMGAIKVAG 2) KDKERKHKKHKDRDKDNDKEHKKHKHRHKDRSKDKDKEKKKDRSGHHDS | 174 124 | 219 172 |
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