<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP17535

Description U-box domain-containing protein 35-like
SequenceMAALSRTLSSMDPAEEGSSTVIAIDKTKNSHFAVKWAVDTILSCSSHHCILVHVCNQSFLDPHNHETDHREGRPPTELELRQLFLPYRGYCARKGIEAKEVILHDIDVPSALIDYIVRNSISNVVVGASNRNVLTRKFKDADVPSTLLKAAPVSCAVYVISKGKVQAVRLAVHQPRTLARTSSNLGSRSLKEVIHDNLPPDTEDPDDTYRTSYGTGRVRKITASDKLSFERSSESLQMTPQGNLGYYSIRTDSPTKAAADSFTSGNSSHGNSDSSDAFSFLSSIDTPFNFFSSNNASSDNLESSVASESPRSPSLSQTPGLEAEKRRIRLELTKAMEMYNLACKEILVARQKARDFQQWQLVEERKLEEAQFAEEAALALAKVERQKTMAALEAAKMQQRLAEMQTQNRKNIEMQAKQKRAVDALPQNNVIYRRYSIDEIEKATDYFNSSLKIGEGGYGPVYKGLLDHTAVAIKILRPDLSQGQKQFQQEVEVLSCIRHPHMVLLLGACPEYGCLVYEYMDNGSLEDRLFQKDSTPPISWPTRFRIAAEIASGLLFLHQTKPEPTVHRDLKPGNILLDLNYRSKIGDVGLARLIPPSVADSITQYHVTSAAGTFCYIDPEYQQTGLLGVKSDVYSLGVMLLQLLTAKPPIGLAHQIEKAIEKDKFPEMLDPSVTDWPIEDALSLAKLALKCCEMRKRDRPDLDSDLLPELERLRDLGIMYSSLKNMAIDDGRRPYDSVPEVRPTVNQGGEIDPYLEVDLQWRSI
Length764
PositionTail
OrganismJuglans regia (English walnut)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fagales> Juglandaceae> Juglans.
Aromaticity0.07
Grand average of hydropathy-0.404
Instability index45.07
Isoelectric point6.04
Molecular weight85276.80
Publications
PubMed=27145194

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP17535
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.30|      17|      18|     370|     386|       1
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  370-  386 (25.72/15.05)	AQFAEEAALALAKVERQ
  391-  407 (26.58/15.75)	ALEAAKMQQRLAEMQTQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     336.93|     110|     135|     505|     626|       2
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  505-  626 (162.40/129.15)	LLGACPEYGcLVYEyMDNGSLEDRlFQKDSTPPIS.WPtrfrIAAEIASGLLFLHQT....KPEPTVHRDLKPG.NILLDLN.YRSKIGDVGLARLIPPsvADSITQYHVTSAAGTfcYIDPeYQQTGL
  643-  759 (174.53/100.73)	LLTAKPPIG.LAHQ.IEKAIEKDK.FPEMLDPSVTdWP....IEDALSLAKLALKCCemrkRDRPDLDSDLLPElERLRDLGiMYSSLKNMAIDDGRRP..YDSVPEVRPTVNQGG..EIDP.YLEVDL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.65|      16|      28|     262|     277|       3
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  262-  277 (29.92/17.65)	FTSGNSSHGNSDSSDA
  291-  306 (27.73/15.88)	FSSNNASSDNLESSVA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      75.68|      23|      29|     175|     203|       4
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  175-  198 (34.82/33.41)	PRTLARTSSNLGsRSLKEVIHDNL
  205-  227 (40.86/20.43)	PDDTYRTSYGTG.RVRKITASDKL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP17535 with Med32 domain of Kingdom Viridiplantae
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