<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP17525
Description |
mediator of RNA polymerase II transcription subunit 15a-like |
Sequence | MRQGLGVKPGVFQQHLSGGQRAAYSHQQLKSGGSFPISSPQLQVASPQILQHSSPQIDQQNVLSSLTKAGTPLQSASSPFVVPSPSTPLAPSPMPGDAEKPITGVSSHSNAGNIGHQQTSGVGAPVPSLAIGTPGISASPLLAEFTGQDGTLGNALMNVSGKSSITEQPLERLIKAVKSMSPKALSASVSDIGSVVSMIDRIASSAPGNGSRAAVGEDLVAMTKCRLQARNFITQDGTNGTRKMKRYTSAMPLSVVSSAGSMNDNFKQLMGSETSDLESTATSSVKRPRIEVNPALLEEIREINQGLFDTVVDISDEDVDPTATAAAADGGEGTIVKCSFIAVALSPNLKSQYTSAQMSPIQPLRLLVPSNYPNCSPILLDKFPVEVSKKYEDLSVKAKSRFSISLRTLSQPMSLGQIARTWDVCARAVISEHAQQSGGGTFSSKYGTWENCLSTA |
Length | 456 |
Position | Tail |
Organism | Juglans regia (English walnut) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Fagales> Juglandaceae> Juglans.
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Aromaticity | 0.04 |
Grand average of hydropathy | -0.198 |
Instability index | 51.82 |
Isoelectric point | 8.50 |
Molecular weight | 47754.44 |
Publications | PubMed=27145194
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Function
Annotated function |
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GO - Cellular Component | nucleus GO:0005634 IEA:UniProtKB-SubCell
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GO - Biological Function | chromatin DNA binding GO:0031490 IEA:InterPro
transcription coactivator activity GO:0003713 IEA:InterPro
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GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP17525
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 275.21| 76| 84| 122| 201| 1
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36- 124 (77.19/43.19) PIssPQ....LQVASPQIlqHSSP..QID.Q...Q.....NVL......SSLTKagTPLQSASSPFVVPSP..STPLApspmpgdaekpitgvsS.HSNA.GNIgHQQTSGVGA
125- 204 (118.98/79.38) PV..PS....LAIGTPGI..SASP..LLA.EFTGQDGTLGNALMnvsgKSSITE..QPLERLIKAVKSMSP..KALSA................S.VSDI.GSV.VSMIDRIAS
205- 287 (79.04/44.41) SA..PGngsrAAVGEDLV..AMTKcrLQArNFITQDGTNGTRKM....KRYTSA..MPL.SVVSSAGSMNDnfKQLMG................SeTSDLeSTA.TSSVKR...
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 52.65| 15| 404| 21| 35| 2
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21- 35 (28.64/20.68) RAAYS.HQQLKSGGSF
427- 442 (24.01/15.99) RAVISeHAQQSGGGTF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 73.90| 22| 48| 345| 366| 3
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345- 366 (38.32/23.89) LSPNLKSQYTSAQMSPIQPLRL
394- 415 (35.58/21.66) LSVKAKSRFSISLRTLSQPMSL
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