<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP17492

Description U-box domain-containing protein 33-like isoform X2
SequenceMADQDMTTYVAVGKDVEDCKSILSWALENNVGSRICIIHVHKPAKLFPLVRSLMTERKVVREHLETMHAIMTEYFLFCQQKGVQAQTQTIEMDSIRVGILKLISKYGIRKLVIGSTTANHYKRKVELGSKKAKYVCKTAPVSCQVQVICKGHLIFTREASAADTENGQSNLNRSRSGPSGYNNRVGSPVIECSDFSKLRSVTVGRNRSTTALAALIAPFPERSKELSSPTSPGDSSYSASSPTRPVEITLNGWNDRNGKALQYSSSLSPPAALDYSSRSSSTLDLAPSVVQQSPRLISSSNGAHNVVERSLEEQLQQAMADLKKEALVRRSGDEYMIDAIRRAQAAEKQRDICIEELRISKEQESSLKSQLAELQKERDDALKEAEGLKRKEEDSNGHMLELPEFSLSKIAEATQGFHESQKIGQGGYGNIYIGRLQTEVAIKKLNSHGSQGHQEFQMEVNVLGQLRHPNLVKLIGSCPEAFALIYEYLPNGSLEDRLKCKDKTPPLSWQTRLRIATELCSVIVYLHSSIRPDKIVHGDLKPANILLDSNFVCKLGDFGICRVLSRGQSSSDSVTLCHNTIPKGTMLYLDPEFHKTGILTVKSDVYSFGIILLQLLTGKSPPYSIVDDVNAALLAGNFESLLDPSAGRWPFEVALCLAELALTCSDKDRKKRPDLGTVVLELLESLRDPAGGT
Length693
PositionTail
OrganismJuglans regia (English walnut)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fagales> Juglandaceae> Juglans.
Aromaticity0.05
Grand average of hydropathy-0.322
Instability index52.08
Isoelectric point8.33
Molecular weight76435.39
Publications
PubMed=27145194

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein serine/threonine kinase activity	GO:0004674	IEA:UniProtKB-KW

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP17492
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      70.21|      23|      25|     342|     364|       2
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  342-  364 (38.40/28.97)	RAQAAE..KQRDICIEELRISKEQE
  368-  392 (31.81/22.70)	KSQLAElqKERDDALKEAEGLKRKE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.81|      18|      39|     223|     240|       3
---------------------------------------------------------------------------
  223-  240 (32.23/17.43)	SKELSSPTSPGDSSYSAS
  264-  281 (31.58/16.94)	SSSLSPPAALDYSSRSSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     169.27|      33|      39|     519|     551|       4
---------------------------------------------------------------------------
  519-  551 (53.76/40.42)	LCS...VIVYLHSSIRPDKIVHGDLKPANI.L.LDSNF
  560-  593 (45.07/32.53)	ICR...VLSRGQSSSDSVTLCHNTIPKGTM.LyLDPEF
  605-  638 (38.11/26.21)	VYSfgiILLQLLTGKSPPYSIVDDVNAA...L.LAGNF
  655-  685 (32.32/20.95)	LCL...AELALTCSDK.DRKKRPDLGTVVLeL.LES..
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     161.69|      52|     363|      88|     144|       5
---------------------------------------------------------------------------
   88-  144 (76.97/78.08)	QTIEMDsirVGILKLISKYGIRKLvIGS...TTANHYKRkVELGSKKAKYVC..KTAPVSCQ
  454-  510 (84.72/65.45)	QEFQME...VNVLGQLRHPNLVKL.IGScpeAFALIYEY.LPNGSLEDRLKCkdKTPPLSWQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.36|      14|      21|     169|     182|       6
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  169-  182 (25.68/16.84)	SNLNRSRSGPSGYN
  193-  206 (23.67/14.94)	SDFSKLRSVTVGRN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      66.89|      17|      19|     303|     319|       7
---------------------------------------------------------------------------
  286-  302 (18.71/ 8.92)	A....PSVVQQS..PRLisSSNG
  303-  319 (27.57/16.30)	A....HNVVERSLEEQL..QQAM
  320-  340 (20.61/10.50)	AdlkkEALVRRSGDEYM..IDAI
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP17492 with Med32 domain of Kingdom Viridiplantae
Unable to open file!