<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP17427
Description |
mediator of RNA polymerase II transcription subunit 33A-like isoform X4 |
Sequence | MLSYSQVVRPVNFSGLLQRLQFLEASELVSPHLNSANQLLAKLSANIQRVMGFEYQLNRSQLSGSLLDIASCKPVSCFHSQFGQSACWAPFDIYMENAMDGKQLPIKSAVDVLTEAIKTLQAFNQASWQETFLALWLSALRLVQRERDPPEGPIPRLEARLCVLLSIVPLAITNVLEDEAKLCHSSTAGATFTGSVESGYGHKMNGKGCASRKDGLISSLQILGHFSGLLCPPLSVTDAANTAARKAASFITNAKNQRDIIRGGSLVDASIKAGGNMRHLIVEACIARNLIDTSAYIWPGYVSAPIISLSDSSSHDKSPWLMFMEGAPLNGSLIDYLIMNPASSLAEIEKLFSIALNGSEEEKSAAAKILCGASLSRGWNIQEHVVRFVVKLLSPPIPPSHTGPGSHLVDDMSMLCALLFGASSIDTVHILSLHGAVPEVAASLMPLCEVFGSLKPASRNKSSKDDEPSIYMVFSFAFLYLLRLWKFYRPPLEQCISERGVAVRGELTLEYLLLLRNRSIASCQVETYSNPNQSEPASGKPIYIDSYPKLRAWYCQNKSCIASTLAGLSSGNPVHQVANKILSMIYWKMTKSAASSGNSSTPTSGSACESPRSTGEDAYQRPVLPAWEVLEAIPFVLEAILTACANGRLSSRDLTTGLRDLVDFLPASLAAIVSYFSAEVTRGIWKPVAMNGKDWPSPAAILPSMESEIKAVLAAVGVDAPSCSTGNSPIMLPLPMAALVSLTITFKLDKSLEYIHSVAGLALEHCASGCPWPSMHIIGSLWAQKIRRWHNFIVVSSSRSIFRQNKEAIAQLLRSCFTSFLGSLNISTSSLSNQSSVNGLLGSTISVGGGGSSVAPGFLFLRSCRTIHNVHYVSDIIVGLVAEYARNLASRWASTDSPRLKSSQASLSIASVRAREVATLGASLLCVTGGVQLVQELFRNTIPTWLISSRKQKLHKVSVVSRIVEGYAMAYLLILSGAIVWGVEAKLTTCAFSRRARAVGVHMDFLAGVLEGNISLGCDPATWKAYLSCLVGLMVRFAPAWIQEVKLETLRKLACGLRGWHECELAISLLERGGTAAIGSVAELLNVIS |
Length | 1089 |
Position | Tail |
Organism | Juglans regia (English walnut) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Fagales> Juglandaceae> Juglans.
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Aromaticity | 0.07 |
Grand average of hydropathy | 0.192 |
Instability index | 48.04 |
Isoelectric point | 8.63 |
Molecular weight | 117504.52 |
Publications | PubMed=27145194
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Function
Annotated function |
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | |
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP17427
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
4| 251.51| 58| 76| 622| 697| 1
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124- 176 (54.24/19.30) NQASWQET..FLALW..LSAlrlvqrerdppegpIP.RLEARL..CV...............LLSIVPLAITNVL
619- 673 (83.20/42.85) ....YQRP..VLPAWEvLEA..............IPFVLEAILTACANGRLSSRDLTTGLRDLVDFLPASLAAIV
691- 740 (80.09/59.25) NGKDWPSPaaILPSME..SE..............I....KAVLAAVGVDAPSC...STGNSPIM..LPLPMAALV
978- 1006 (33.99/ 9.22) ...................A..............IVWGVEAKLTTCA...FSRRARAVGVH..MDFL........
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 156.88| 51| 210| 15| 68| 2
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15- 68 (79.89/58.26) GLLQRLQFL.EASELVSPHLN..SANQLLAKLSANIQRVMGFEYQLNRsqlSGSLLD
215- 268 (77.00/48.69) GLISSLQILgHFSGLLCPPLSvtDAANTAARKAASFITNAKNQRDIIR...GGSLVD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 142.33| 47| 255| 551| 602| 3
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551- 602 (76.48/59.89) RAWYCQNK........SCIASTLAGL..SSGNPVHQVA.NKILSmiyWkmTKSAASSGNSSTP
799- 856 (65.84/38.19) RSIFRQNKeaiaqllrSCFTSFLGSLniSTSSLSNQSSvNGLLG...S..TISVGGGGSSVAP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 35.35| 9| 680| 368| 379| 6
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368- 379 (15.15/13.34) KILCGAslsRGW
1052- 1060 (20.21/ 9.31) KLACGL...RGW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 92.39| 26| 448| 69| 96| 8
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69- 96 (43.65/37.20) IASCKpVSCFhSQFGQSACWAPFDIYME
520- 545 (48.75/30.32) IASCQ.VETY.SNPNQSEPASGKPIYID
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