<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP17426
Description |
mediator of RNA polymerase II transcription subunit 33A-like isoform X3 |
Sequence | MGSECDLGGFEQVVLETLKRCQQQNESTLVWVMEVAKCIRSLGVALPCLELGQVLVSQLCFDDNNSSLWKFVELALSSGLLYPLHVLSLLTSRILPHRRSQPKAYRLYLELLSRYAFSFNPGKADACKEKITKSVDVALQLSQLYRIRVLELGQAFVLFFFSMIIGLIDSTLDDWGLHMTPTDGPSLVLGSTDHHDMDIDFKGSHNVKGNEHHEKMRTTNSFTAIEVLGKLTESRKAMVILRLVHLNMPVNFSGLLQRLQFLEASELVSPHLNSANQLLAKLSANIQRVMGFEYQLNRSQLSGSLLDIASCKPVSCFHSQFGQSACWAPFDIYMENAMDGKQLPIKSAVDVLTEAIKTLQAFNQASWQETFLALWLSALRLVQRERDPPEGPIPRLEARLCVLLSIVPLAITNVLEDEAKLCHSSTAGATFTGSVESGYGHKMNGKGCASRKDGLISSLQILGHFSGLLCPPLSVTDAANTAARKAASFITNAKNQRDIIRGGSLVDASIKAGGNMRHLIVEACIARNLIDTSAYIWPGYVSAPIISLSDSSSHDKSPWLMFMEGAPLNGSLIDYLIMNPASSLAEIEKLFSIALNGSEEEKSAAAKILCGASLSRGWNIQVPEVAASLMPLCEVFGSLKPASRNKSSKDDEPSIYMVFSFAFLYLLRLWKFYRPPLEQCISERGVAVRGELTLEYLLLLRNRSIASCQVETYSNPNQSEPASGKPIYIDSYPKLRAWYCQNKSCIASTLAGLSSGNPVHQVANKILSMIYWKMTKSAASSGNSSTPTSGSACESPRSTGEDAYQRPVLPAWEVLEAIPFVLEAILTACANGRLSSRDLTTGLRDLVDFLPASLAAIVSYFSAEVTRGIWKPVAMNGKDWPSPAAILPSMESEIKAVLAAVGVDAPSCSTGNSPIMLPLPMAALVSLTITFKLDKSLEYIHSVAGLALEHCASGCPWPSMHIIGSLWAQKIRRWHNFIVVSSSRSIFRQNKEAIAQLLRSCFTSFLGSLNISTSSLSNQSSVNGLLGSTISVGGGGSSVAPGFLFLRSCRTIHNVHYVSDIIVGLVAEYARNLASRWASTDSPRLKSSQASLSIASVRAREVATLGASLLCVTGGVQLVQELFRNTIPTWLISSRKQKLHKVSVVSRIVEGYAMAYLLILSGAIVWGVEAKLTTCAFSRRARAVGVHMDFLAGVLEGNISLGCDPATWKAYLSCLVGLMVRFAPAWIQEVKLETLRKLACGLRGWHECELAISLLERGGTAAIGSVAELLNVIS |
Length | 1274 |
Position | Tail |
Organism | Juglans regia (English walnut) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Fagales> Juglandaceae> Juglans.
|
Aromaticity | 0.07 |
Grand average of hydropathy | 0.148 |
Instability index | 47.03 |
Isoelectric point | 8.48 |
Molecular weight | 138679.81 |
Publications | PubMed=27145194
|
Function
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP17426
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 81.34| 29| 98| 49| 89| 1
---------------------------------------------------------------------------
50- 89 (43.24/47.72) ELGQVLVsqLCF.....DDNNSSL..WkfvelalssGL.LYPLHVLSL
151- 187 (38.10/17.36) ELGQAFV..LFFfsmiiGLIDSTLddW.........GLhMTPTDGPSL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 371.83| 95| 99| 936| 1032| 2
---------------------------------------------------------------------------
815- 931 (114.00/68.28) .LEAIPFVL.E.AILTACAN..GrlssrdlttglrdlvdfLP.ASLAAIVSYFSAEVT....RgiWKP..VAMNGKD..WPSPAAILPSMESEIKAVLA.AVGVDAPSCSTGNSpimlplpMAALVSLTITF
936- 1032 (158.78/104.16) SLEYIHSVA.G.LALEHCAS..G.................CPWPSMHIIGSLWAQKIR....R..WHNfiVVSSSRSIFRQNKEAIAQLLRSCFTSFLG.SLNISTSSLSNQSS.......VNGLLGSTISV
1037- 1127 (99.05/58.26) S.....SVApGfLFLRSCRTihN.................VHYVSDIIVG.LVAEYARnlasR..WAS...TDSPRLKSSQASLSIAS.VRAREVATLGaSLLCVTGGV...QL.......VQELFRNTI..
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 72.66| 24| 31| 252| 275| 4
---------------------------------------------------------------------------
252- 275 (42.22/21.49) FSGLLQR.LQF...LEASELVSPHLNSA
282- 309 (30.45/13.71) LSANIQRvMGFeyqLNRSQLSGSLLDIA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 93.06| 22| 25| 547| 571| 5
---------------------------------------------------------------------------
529- 545 (24.67/ 7.74) .LI.DTSAY...IWPGYV.SAPI
547- 568 (40.39/29.39) SLS.DSSSHDKSPWLMFMEGAPL
592- 614 (28.00/10.44) SIAlNGSEEEKSAAAKILCGASL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 46.95| 13| 600| 616| 630| 7
---------------------------------------------------------------------------
616- 630 (20.81/17.70) RGWniQVPEVAASLM
1243- 1255 (26.14/15.11) RGW..HECELAISLL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 76.20| 21| 31| 708| 728| 9
---------------------------------------------------------------------------
708- 728 (38.89/22.12) CQVETYSNPNQSEPASGKPIY
740- 760 (37.30/20.93) CQNKSCIASTLAGLSSGNPVH
---------------------------------------------------------------------------
|