<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP17406

Description U-box domain-containing protein 33-like
SequenceMGSSRPEKALEDSVPAHVLISENTICAAVGKDVEEGKSILLWAFHNSGGRKICILHVHHPPNLIRHPLGPAKTPAEYVNEALVRESQDKERVNMQEILHKYDHFCGKMGVRAERLQTETESTIEEGIVKLITQHGVRRLVMGAAAKRHYNRNMMDLKSRKAKYVCERAPVYCFIQFICKGHLIHARKPRTDTENGESSLMMLRSRSVPSGNNMNVAQTGISNMFRSQSVAQNHIREYRNIVKSVFNAMFQRGTKEPSISPKSRSEVEHNSTTSDHESDVLSLRSPSGSSPSTYSPKGVLDLTLGPLVLKPSTPMWEGFEFMSTPFSPGSSPVVDVASSNEARSVADKSLDNPHYEKLQQVMVYAEKLTLLQQKVARELGEAMSKAQEELILRREIEEGKAKEREIETMKNQIDQLMEKFQIFQERETSLKNQIVELQVERDNAVKEAEELRHKQGECSSWNNAQYFAEFSLSEIKKATQNFHESLKIGGGGYGNIYKGYLHQIEVAIKRLHSQNLHSNRGQGPSEFQMEVRVLSRLSHPNLVRLIGSCPEEFALIYEYLPNGSLEDRLKCRDKSPPLLWKTRICIAAELCSVLVYLHSSKPHSIVHGDLKPSNILLDASFVSKLSDFGICRVLCHDQCSNNNTTLCRITVPKGTLGYVDPEFIETGKLTMKSDVYSFGIILLQLLTNRSTISIANEVKYALGTMSLQAVLDPSAGDWPIVVAQSLAELALWCCDRNQKNRPELGSDVLGKLESMRASS
Length758
PositionTail
OrganismJuglans regia (English walnut)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fagales> Juglandaceae> Juglans.
Aromaticity0.06
Grand average of hydropathy-0.420
Instability index51.00
Isoelectric point8.18
Molecular weight85057.22
Publications
PubMed=27145194

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP17406
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.83|      14|      19|     401|     418|       1
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  401-  415 (20.87/21.68)	KEREiETMKNQIDQL
  423-  436 (23.97/ 9.87)	QERE.TSLKNQIVEL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      64.45|      18|      18|     280|     297|       2
---------------------------------------------------------------------------
  280-  297 (34.87/21.86)	LSLR.SPSGSSPSTYSPKG
  299-  317 (29.58/17.35)	LDLTlGPLVLKPSTPMWEG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      99.83|      23|      23|     504|     526|       4
---------------------------------------------------------------------------
  474-  492 (24.75/14.56)	....IKK.ATQNFHESLKIGGGGY
  504-  526 (41.49/30.01)	EV.AIKRLHSQNLHSNRGQGPSEF
  529-  552 (33.58/22.71)	EVrVLSRLSHPNLVRLIGSCPEEF
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP17406 with Med32 domain of Kingdom Viridiplantae
Unable to open file!