<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP17397

Description cyclin-dependent kinase 19 isoform X1
SequenceMDYDFKTKLAAERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYFVEDPLPTTDVFAGCQIPYPKREFLNEDEPEEKTEKNQTQQHQQTTGQNQAQTQQQVAAQQAPSQQSSAQTNGTAGATGATVGGGLQHSQDQGPPNKKPRIGPSGASSGTGVLPSEYQHSGSRLGYQSTVQGSTQPQSSMGYSSSSQQSSQYSHQTHRY
Length493
PositionKinase
OrganismAustrofundulus limnaeus
KingdomMetazoa
LineageEukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Actinopterygii> Neopterygii> Teleostei> Neoteleostei> Acanthomorphata> Ovalentaria> Atherinomorphae> Cyprinodontiformes> Rivulidae> Austrofundulus.
Aromaticity0.09
Grand average of hydropathy-0.690
Instability index47.10
Isoelectric point8.66
Molecular weight55938.61
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein serine/threonine kinase activity	GO:0004674	IEA:UniProtKB-KW

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP17397
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     166.28|      32|      36|     426|     457|       1
---------------------------------------------------------------------------
  364-  393 (37.91/16.82)	..PEEKTEKN......QTQQHQQTTGQNQAQTQQQVAA
  394-  424 (25.98/ 9.52)	QQAPSQQSSAqtngtaGATGATVGGGLQHSQ.......
  426-  457 (55.17/27.37)	QGPPNKKPRI......GPSGASSGTGVLPSEYQHSGSR
  465-  492 (47.22/22.51)	QGSTQPQSSM......GYSSSSQQS....SQYSHQTHR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      79.27|      25|      40|     102|     129|       2
---------------------------------------------------------------------------
  102-  129 (44.55/41.56)	HDLWhiiKFHRASK.ANKKPM.QLP.RGMVK
  143-  170 (34.73/23.31)	HANW...VLHRDLKpANILVMgEGPeRGRVK
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP17397 with CDK8 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) IPYPKREFLNEDEPEEKTEKNQTQQHQQTTGQNQAQTQQQVAAQQAPSQQSSAQTNGTAGATGATVGGGLQHSQDQGPPNKKPRIGPSGASSGTGVLPSEYQHSGSRLGYQSTVQGSTQPQSSMGYSSSSQQSSQYSHQTHRY
351
493










Molecular Recognition Features






MoRF SequenceStartStop




1) GPPNKKPRIGPS
2) QYSHQTHRY
3) SRLGYQSTVQGSTQPQSSM
427
485
456
438
493
474