<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP17073
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MPMMMDDGINVDDLFGEPASLELALPPATTTKGLAQRLDELRLLGCCQKIAWSRQGCIAYITHDSSRVNLRHLECRPSDGKWILSEDTPLNPVAEAHGGHPLAHLSWNELGSELAVADSSGRVSIYNIAIGLNSLAGQRQAIYDADDDGGQIVGMMWLNIQRSVHAFNQAAKVQGRWAYSPFRRRPIGPLHPAGKAALVCVTKSGMIRLLYQNPDARWAEISAELKTTAYSDRLLTHAAIGAVQGGIVIATHSACEKLCFYRAQINWTPAQWDPSQLKHAPNQFPVPNFRFMHAKVETSSSVPSVNRAEGQNPNDAPQSTNSLYCLTHLDIIMAAHDNPSGMTTNPWIVAVFSIPPHAVPDPSQQLPSSVIVRWQLESAPPVLHPKFDEVTSKKNNVQVKPKTAIRRLEDIQCDKYVLSIDQTEFGNVLAITYDDSTITFYDPKTMAILNGIDDANTVTSLAQAGFSYPPDTPGLYIGFSPSGCIAMTLDGDGQTQLRVMEHTYGVVNGIPDESKLSAAIASLTLAFCRGCGSELNTDDILMILRRQVSPDDQATFVNEVYRALAVNCNFTQENDKLMSHQYLPRCLSIQAALGFKDKYKSRSFASNVPWTILQLRHASVLYALFLQFIKGAQTEPPDPDALRILLGNTKWALDFLHFVLNDLLDLADELEDVLDDQEALAQKLKTTTSLPLVILLSSMSRAFLRFICRGLRGIHGIHTGYGAAPLSGDARLSYSEVCQTIDASPVRIDVYEKFVAGVDSAVRHGYHAAGFGDAERPGPERELLVNARIAPVLVPAVATILRQTVPALKPDIDRLAIYTADYSWLGLGTDRRAEMYRRSRDVDIIKKIPVRPVQVSTGGAGDSAKGFVVAHHQPRRRCVRCCEILSGMYTPRPSLSFRMLYKLGYVRYCICGGGWTLETDAK |
Length | 922 |
Position | Tail |
Organism | Aspergillus steynii IBT 23096 |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes>
Eurotiomycetidae> Eurotiales> Aspergillaceae> Aspergillus>
Aspergillus subgen. Circumdati.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.137 |
Instability index | 39.90 |
Isoelectric point | 6.50 |
Molecular weight | 101490.81 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP17073
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 105.70| 34| 167| 616| 651| 1
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616- 651 (52.71/39.62) RHaSVLYALfLQFIKGAQTEP...PDPDALRILLGNTKW
656- 680 (31.72/15.63) LH.FVLNDL.LDLADELEDVL...DDQEAL.........
803- 824 (21.27/ 7.62) .................QTVPalkPDIDRLAIYTADYSW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 77.24| 24| 46| 705| 731| 7
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705- 731 (34.42/29.49) RFIcRGLRGihGIHTGYGAAPLSGDAR
753- 776 (42.83/23.73) KFV.AGVDS..AVRHGYHAAGFGDAER
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 92.24| 26| 46| 193| 218| 8
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193- 218 (45.45/32.34) AGKAALVCVTKSGMIRLLYQNPDARW
242- 267 (46.79/33.52) AVQGGIVIATHSACEKLCFYRAQINW
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