Description | Mediator of RNA polymerase II transcription subunit 17 |
Sequence | MSDSFSLPLRPRLDRPDPPDPLPVEIAQINTQWGSFRHVSEDFLRRRIADQSDDASDDHDEDESPTEVDATERLDQLYRKRAEITQFAHQAHMEALFALDFVSLLISQHAPRQAETSMSAYLKQVAPMGSLTPEVVDPPPKPDAVRRDTEAVSRGWRLQNFNSAANKLLNAASRLESEVAAETRYWNEVLSIQNQGWKVCRLPRDRQALGVQYGFLEATPIFRDRGLASLRRADDGSLLLNQGLVPQKARRVRVRVKTDDRWTGASRTPPPPTSDADAIEARIRQARDTVYEEELFHEMTREARILAPHGVTTRQNLVRVPVSDVQEIWLDLVDTDGDSSPPADPETTAEDDRLADALSHALRILLAHAHRQNRHRREQPPPPLTPRRRHTPEYHILRPLLAGLQHRAHVRALEAVLGDLHRVRRAAGLPGDGTVTPFASVRPPASHPGVPAVESLVRTLLRPLESTLGGPLAAPQASIHVTVRTTVAGPPGGTVFDLAVHLPAFPDVQPPARISLRSEAEAVLSHVLLLDVVAAVAAAPAVPPARRWEPAAPHHGELITAGGPSAKNRKLTVHLSRDALRVEAVAVGGLDPFGRPTPDPTATPRSRTWTAESTGTGLMDFVGEVSQE |
Length | 628 |
Position | Head |
Organism | Aspergillus candidus |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes> Eurotiomycetidae> Eurotiales> Aspergillaceae> Aspergillus. |
Aromaticity | 0.05 |
Grand average of hydropathy | -0.456 |
Instability index | 53.68 |
Isoelectric point | 6.31 |
Molecular weight | 69117.99 |
Publications |
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364140 |
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP17053 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 4| 275.13| 55| 58| 380| 435| 1 --------------------------------------------------------------------------- 269- 306 (55.98/20.14) P..PPPTSD..AD..AIEARI..R......QARDTVYE.EEL...........FH.EMTRE.ARI.....L 380- 435 (99.23/43.76) P..PPPLTPRRRH..TPEYHIL.RPLLAgLQHRAHVRALEAVLGD........LH.RVRRA.AGLPGDGTV 437- 495 (49.21/16.91) P..FASVRPPASHpgVPAVESLvRTLL.........RPLESTLGGplaapqasIHvTVRTTvAGPPG.GTV 506- 558 (70.71/27.17) PdvQPPARISLRS..EAE.AVL.SHVLL.LDVVAAVAAAPAV.PP........AR.RWEPA.A..PHHGEL --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 76.07| 20| 119| 14| 33| 2 --------------------------------------------------------------------------- 14- 33 (38.57/16.83) DRPDPPDPLPVEIAQINTQW 137- 156 (37.50/16.17) DPPPKPDAVRRDTEAVSRGW --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) DFLRRRI 2) EIAQINTQWGSFRH 3) PLRPRLDR | 42 25 8 | 48 38 15 |
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