<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP17051
Description |
Mediator of RNA polymerase II transcription subunit 5 |
Sequence | MTDGRVMQDVMLSMSAGNIPATMAEAIGIFSATVDWIQAVVAWHNSHMDAGQQTGGLMSSPDAASVFETLGIILTALSGNVKGLEVLSGDSHAALKIKLGQALSAYLPLCAEVSLGLRDRLASLQKAFNLYGEPNSKGLDMSMMDSVNVNALQFEASVMDGPVVNSRAGLYIYINAMLVARPLVDDNVLLSYLANRYAGHYDALIEEIITASFDVLSNAMYRNESHRTMFVFRSWLVNKLPSFFAAMSATSLVPSNMSPYINNALSRLNPKIYPSFSQMFSMQGNAVLSDVRQEFVFACASHRLVPEHDIERLLGEPPMQAPRVGYIKDDLVTQINSHHERAEQLIGEIESTEGNAGAIVGAITEVMHNLCSQKETMTLKNICNSLSRRPQALDVILLFRSPKQMLQPLCELLDSWHWDEDQGESQPVYDEFGSILLLVLTFNYRYNLHPHDLGIVGSDSFVLRLLERGSCSQKLEDLSDKQNKNLGAWIGALFIAEGISEETMSACSPQEFYLLVSTLFDQSLTACEAGKVEFDTLKGGFEYLLEPFLLPSLVVALTWLGNHIWETESEPTIPIKALQSLVNPSSISGEAREIHRTVLNITARSLESQLKDVRARHPSRADIKPILDALEPCLSFQRTGTSHRSELETWTTHPGGGLLDSIRNTFQSLVFWGSSPDVTMEPPSYTHRQLLSGIRILGAPRVLHALLDEIKLQTETGNGDIALEIGAVIVCAPLPESFAVEQNSFHPVDTSKEPAPRCPILTLRDVLFLAHDSVPKLSEKEPLRAEVLVRLFRRVNTLMAPSQTPNLDVTNIIHNMSLPVGDHARMDLDLPGDGPDPGDNEDSDHLNRMLDNAAAAAAAGLDSGVGQGMGSQLDTSIDDMLNAAVGEADMTVGNPEFYDLDSMEGMF |
Length | 907 |
Position | Tail |
Organism | Aspergillus candidus |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes>
Eurotiomycetidae> Eurotiales> Aspergillaceae> Aspergillus.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.051 |
Instability index | 49.70 |
Isoelectric point | 4.81 |
Molecular weight | 99392.96 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 ARBA:ARBA00003669
ECO:0000256 RuleBase:RU364142
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP17051
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 1005.94| 334| 368| 25| 390| 1
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25- 390 (504.22/402.62) EAIGIFSATVDWIQAVVAWHNS.HMDaGQQTGglmSSPdaasVFETLG.IILTALSGNVK......GLEVLSGDSHAALKIKLGQALSAYLPLCAEVSLGLRDRLASLQKAFNLYGEPNS..KGLDMSMMDSVNVNalQFEASVMDGPV.VNSRAGLYIYINAMLVARPLVddnVLLSYLANR.YAGHYDALIE.EIITASFDVLSNAMYRNESHRTMF..VFRSwLVNKLPSFFAAM.SATSLVP..SNMSPYInnALSRLNPKIYPSFSQMFSMQGNAVLSDVRQEFvfacasHRLVPEHDIERLLGEPPmqaprvGYIKDDLVT..QINSHHERAEQLIGEIE.STEGNAGAIVGAITEVMhnLCSQ.KETMTLKNicNSL.....SRRP
394- 754 (501.71/321.90) DVILLFRSPKQMLQPLCELLDSwHWD.EDQGE...SQP....VYDEFGsILLLVLTFNYRynlhphDLGIVGSDSFVLRLLERGSCSQKLEDLSDKQNKNLGAWIGALFIAEGISEETMSacSPQEFYLLVSTLFD..QSLTACEAGKVeFDTLKGGFEYLLEPFLLPSLV...VALTWLGNHiWETESEPTIPiKALQSLVNPSSISGEAREIHRTVLniTARS.LESQLKDVRARHpSRADIKPilDALEPCL..SFQRTGTSHRSELETWTTHPGGGLLDSIRNTF......QSLVFWGSSPDVTMEPP......SYTHRQLLSgiRILGAPRVLHALLDEIKlQTETGNGDIALEIGAVI..VCAPlPESFAVEQ..NSFhpvdtSKEP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 110.22| 25| 25| 856| 880| 2
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834- 853 (27.78/13.82) ....GPDPGDNED.SDHLNRMLDNA
856- 880 (41.85/24.68) AAAAGLDSGVGQGMGSQLDTSIDDM
883- 906 (40.59/23.70) AAVGEADMTVGNPEFYDLD.SMEGM
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