<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP17007

Description Heat shock cognate 70 kDa protein
SequenceMAGKSEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQAAMNPINTVFDAKRLIGRRFSDPSVQNDSKLWPFKVIPGAGEKPMIVVKYKGEEKQFTAEEISSMVLTKMKEIAEAFLGKTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKTNSSSEKNVLIFDLGGGTFDVSILTIEDGIFEVKATSGNTHLGGEDFDNRMVNHFMQEFKRKHKKDISNNPRALRRLRTACERAKRTLSSSAQTTIEIDSLFEGIDFYSSITRARFEELNIDLFRKCMEPVEKCMKDAKMDKRTIDDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGDGNEKVQDMLLIDVAPLSLGLETAGGVMTVLIPRNTQIPTKKEQVFSTYSDNQPGVLIQVYQGERTRTKDNDLLGKFELSGIPPAPRGVPQITVCFDIDANGILSVSAEDKTSGQKNKITITNEKGRLSREEIEKLLQEAERYKTEDEEHKKKVEAKNALENYTYNMRNTIKDEKIGGKLNSADKHKIEEALEQIIQWIDGNQLAETDEFEDKIKELEGLCNPIIAKLYQGGGEATMDEDGHRGGSDAGPKIEEVD
Length644
PositionUnknown
OrganismDendrobium catenatum
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Asparagales> Orchidaceae> Epidendroideae> Malaxideae> Dendrobiinae> Dendrobium.
Aromaticity0.06
Grand average of hydropathy-0.481
Instability index35.14
Isoelectric point5.31
Molecular weight71193.80
Publications
PubMed=26754549
PubMed=28902843

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP17007
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      93.86|      26|     105|      40|      68|       1
---------------------------------------------------------------------------
   16-   38 (35.22/21.28)	TTYSCVGVWQHDR.VE....I.IANDQGN..
   40-   65 (45.21/31.10)	TTPSYVAFTDTERLIG....D.AAKNQAAMN
   71-   93 (13.43/13.36)	.......F.DAKRLIGrrfsDpSVQNDSKLW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      88.92|      19|      75|     341|     359|       2
---------------------------------------------------------------------------
  341-  359 (32.65/17.68)	VLVGGSTRIP.KVQQLLQDF
  418-  437 (26.62/13.30)	VLIPRNTQIPtKKEQVFSTY
  448-  465 (29.64/15.50)	VYQGERTR.T.KDNDLLGKF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     133.24|      44|      69|     217|     266|       3
---------------------------------------------------------------------------
  217-  261 (74.24/60.07)	TIE.DGIFE.VKATSGNTHLGGED.....FDNRM..VNHFMQEfKRKHKKDISN
  287-  339 (59.00/32.31)	TIEiDSLFEgIDFYSSITRARFEElnidlFRKCMepVEKCMKD.AKMDKRTIDD
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP17007 with Med37 domain of Kingdom Viridiplantae
Unable to open file!