<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP16903
Description |
"Transcription elongation factor A (SII), 3" |
Sequence | MGPAEELVRIAKKLDKMVARKSTEGALDLLKSLTGYTMTIQLLQTTRIGVAVNSVRKHCSDEEVVASAKILIKNWKRLLEPSSTPKKEKDVDGKKEKDTDREKEKKGKGLDFPNCPNEGAKHPRVPAEKHREKHKERKPSKSASCATTPRGHPAETVPERYPPKGTGTLASSKSPLDGKKERRDSADSRSSSASAVSSSSSPQKRPSGERGASVGTSPSPAPTGSRRNSSDSKEERANSSKAKAETPRTPTSPTFSPSPCLLAPCYLTGDSVRDKCIEMLTAALRMDDDYKEFGVNCEKMASEIEDHIFQELKSTDMKYRNRVRSRISNLKDPKNPGLRRNVLCGAIAPDLIARMTAEEMASDELKELRNAMTQEAIREHQMAKTGGTVTDLFQCGKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC |
Length | 433 |
Position | Unknown |
Organism | Columba livia (Rock dove) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi>
Archelosauria> Archosauria> Dinosauria> Saurischia> Theropoda>
Coelurosauria> Aves> Neognathae> Columbiformes> Columbidae> Columba.
|
Aromaticity | 0.03 |
Grand average of hydropathy | -0.905 |
Instability index | 51.24 |
Isoelectric point | 9.37 |
Molecular weight | 47793.77 |
Publications | PubMed=23371554
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Function
Annotated function |
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GO - Cellular Component | nucleus GO:0005634 IEA:UniProtKB-SubCell
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GO - Biological Function | translation elongation factor activity GO:0003746 IEA:UniProtKB-KW
zinc ion binding GO:0008270 IEA:InterPro
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GO - Biological Process | regulation of transcription, DNA-templated GO:0006355 IEA:InterPro
transcription, DNA-templated GO:0006351 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP16903
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 112.34| 38| 83| 299| 344| 1
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299- 344 (47.38/60.69) KMASEIEDhIFQ..ELKSTDMKYrNRVRSRISNlkDPknpgLRRNVLC
384- 423 (64.96/46.21) KTGGTVTD.LFQcgKCKKKNCTY.NQVQTRSAD..EP....MTTFVLC
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 81.68| 25| 25| 120| 144| 2
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100- 131 (29.96/10.96) DREKEKK.GKG....LDfpncpnegAKHPR.VPAEKHR
132- 155 (24.22/ 7.60) EKHKERKPSKS....AS.......cATTPRgHPAE...
156- 183 (27.51/ 9.53) .TVPERYPPKGtgtlAS........SKSPL.DGKKERR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 97.53| 33| 55| 197| 234| 3
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197- 234 (53.46/35.99) SSSSSPQKRPSgergaSVGTSPSP...AP................TGSRRNSSDSKE
241- 292 (44.07/20.45) KAKAETPRTPT.....SPTFSPSPcllAPcyltgdsvrdkciemlTAALRMDDDYKE
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