<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP16873

Description Uncharacterized protein
SequenceMASKTEGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQDDMRHWPFRVVAGPGDKPMIVVTYKGEQKHFSPEEISSMVLTKMKEIAEAYLGQTIKNAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKHKKDISGNARALRRLRTACERAKRTLSSTTQTTIEIDSLYEGVDFYATITRARFEELNMDLFRKCMEPVEKCLRDAKIDKSQVHDVVLVGGSTRIPKVQQLLLDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGDQKVQDLLLLDVTPLSLGIETAGGVMTVLIPRNTTIPTKKEQVFSTYLDNQTSVLIQVYEGERARTKDNNLLGTFELKGIPPAPRGVPQINVCFDIDANGILNVSAEDKTAGVKNQITITNDKGRLSKEDIERMVQEAERYKAEDEQVKKKVEAKNALENYAYNMRNTVKDEKIGGKLSPSDKESIEKAVNETIEWLDRNQLAEVDEFEDKQKELEGICNPIIAKIYQGGAGDMPMGSGSGAQAGGGASAGAGPKIEEVD
Length650
PositionUnknown
OrganismPunica granatum (Pomegranate)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Myrtales> Lythraceae> Punica.
Aromaticity0.06
Grand average of hydropathy-0.414
Instability index31.56
Isoelectric point5.34
Molecular weight71312.89
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP16873
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     108.40|      36|      41|     304|     344|       2
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  304-  344 (58.22/54.01)	TR.ARFEELNMDLFR.....KCMEPVEKCLRDAkidksQVHDVVLVG
  347-  388 (50.18/35.00)	TRiPKVQQLLLDFFNgkelcKSINPDEAVAYGA.....AVQAAILSG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      38.75|      10|      26|     206|     215|       3
---------------------------------------------------------------------------
  206-  215 (19.09/10.76)	LGGGTFDVSL
  234-  243 (19.67/11.31)	LGGEDFDNRL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      75.85|      18|      21|      38|      55|       6
---------------------------------------------------------------------------
   16-   33 (18.49/ 8.89)	....TTYSCVGVWQNDRveIIA
   38-   55 (32.65/20.60)	NR..TTPSYVAFTDTER..LIG
   60-   78 (24.72/14.04)	NQvaMNPQNTVF.DAKR..LIG
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP16873 with Med37 domain of Kingdom Viridiplantae
Unable to open file!