<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP16844
Description |
Mediator of RNA polymerase II transcription subunit 31 |
Sequence | MASGKDDVDAAAAASSPPSSKNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYMKFIMYPHCLFFLELLQNPNFRAAMAHPGNKELAHRQQFFFWKNYRNNRLKHILPRPLPEPTPAPTAVPSALAPPPAPAPPANMAATAPPPPALSPMQYAVPPGSSLMKNDMRNTAIDRRKRKKEG |
Length | 205 |
Position | Middle |
Organism | Punica granatum (Pomegranate) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> malvids> Myrtales> Lythraceae> Punica.
|
Aromaticity | 0.12 |
Grand average of hydropathy | -0.596 |
Instability index | 61.42 |
Isoelectric point | 9.39 |
Molecular weight | 23331.54 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364129
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription, DNA-templated GO:0006355 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP16844
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 67.63| 18| 19| 134| 151| 1
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134- 151 (35.89/12.99) PRPLPEPTPAPTA.VPSAL
155- 173 (31.74/10.77) PAPAPPANMAATApPPPAL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 90.39| 19| 19| 68| 86| 2
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49- 65 (22.63/10.43) ..YIHYLAQNRYFEDEAFI
68- 86 (36.30/20.60) LKYLQYWQRPEYMKFIMYP
89- 107 (31.46/16.99) LFFLELLQNPNFRAAMAHP
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