<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP16838

Description Uncharacterized protein
SequenceMVAFVYSTMNPSSRYLGVNAADITDESDGIKIISKKLQNRKVLVVLDDVYDPEQIGKLAGEAGWFREGSRIIITSRNKNAPVFEGGRVEIFEAEPMKFEESLLLFSRHAFGKENPAEDFHGLSEKAVRITGGLPLALEVVGSKLRTSDRGHWNHIIGTLQKIPEKKVEDRLKIGYDALRLEVKEIFLDIACFFINEKKTKAMYMWQACDFEPELAVQELVNACLVKLTNENRFWMHDQLRDLGRKLIRDERLKHHGKPCSRIWMHEDALKVLQDEEGTNLHLKNLVVLDLSESSVSETWAGWRHIGMCKELKVLDLRRCDHLTETPDLSMCTKLERLILKGCINLAQIDHSVGKLKCLKYLNASGCIHIREIPREVCCLDGLVDIVMIMEQSFNCSYKLPDSIERLERLQRLCVSLGRSRPPSSLGDLKSLTMLVLSRSEIAELPESIGGLVKLEFLSLFYCKDLKKLPNSIGSLKSLVELNISMSGIVELPDEVVNLQKLKVIDMRGCDIRRLPDFLGNLEKLERLDVFSCNFSEAVPSAIKGITSSLKVSSSAWDKSCYRYWKREWLVQSMQIPTFFHRWQGYGQNNRHCSWSRNGSNNAIAYSSSLGSSGSSSCQQAKQQQQQLPTQLQAHQMSQLHPMNEMKIRPGMGVKPGVFQQHHSVTGQRPAYPCQQLKLGSSFPIFSPQLLQAVSPQIPQHSSPQIDQQDLLTSVTKTGTPLQSASSPFACNLVEANHVLKEEIREINQQLIDIIVDISDEDVDPTAAAAVAEGGEGVVSPIQPLRLLVPSNYLNCSPVLLDKFPVEVSKEYEDLSAKAKSRFSISLRRLSQLMSLKDIARTWDNCSRAVILEYAEQSGGGSFSSNHRGLRNSQPHRRCWCTLPKSSELPRRSAFTPITRSWATSSGGRLEVVLCTFLLCRPQTTLKPKIVFFIGNGFRGPLFHELILRNPNTYTLRRNIEFCLSEGVTPDGVSKFMVNQPRAAVQTPERMVSAVELVKRMGIEPKSGMFIHALLRIMLSMNEANWNHKVEVLKSLRLRQRQRVLEILLSKGLLQVEKSNGWIYTLPEKCFLRKDIVKNLNEIPDLMEIYRGSSDKEKGTRKKKRESKIA
Length1109
PositionTail
OrganismPunica granatum (Pomegranate)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Myrtales> Lythraceae> Punica.
Aromaticity0.07
Grand average of hydropathy-0.286
Instability index50.93
Isoelectric point8.92
Molecular weight125390.62
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ADP binding	GO:0043531	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP16838
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             8|     201.26|      20|      21|     491|     510|       1
---------------------------------------------------------------------------
  325-  344 (23.43/10.60)	T.....PD.LSMCTKLERLI..LK.....GCiN
  372-  396 (19.31/ 7.41)	I.....PREVCCLDGLVDIV..MImeqsfNC.S
  399-  415 (24.16/11.17)	L.....PDSIERLERLQRLC..V.........S
  416-  440 (20.81/ 8.57)	LgrsrpPSSLGDLKSLTMLV..LS.....RS.E
  444-  463 (29.98/15.68)	L.....PESIGGLVKLEFLS..LF.....YC.K
  468-  487 (18.01/ 6.41)	L.....PNSIGSLKSLVELNisMS.....G...
  491-  510 (32.55/17.66)	L.....PDEVVNLQKLKVID..MR.....GC.D
  514-  533 (33.01/18.02)	L.....PDFLGNLEKLERLD..VF.....SC.N
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.46|      17|      28|     232|     253|       2
---------------------------------------------------------------------------
  232-  253 (28.66/27.60)	RFWMH.DQLrdlgrKLIRDE.....RLK
  261-  283 (23.80/11.65)	RIWMHeDAL.....KVLQDEegtnlHLK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     164.55|      39|      40|     622|     660|       3
---------------------------------------------------------------------------
  571-  619 (44.13/25.78)	.QSMQIPTffhRWQGYGQNNRHcswsrngSNNAIAY.SSSL..GSSgSSSCQQ
  622-  660 (69.62/45.26)	QQQQQLPT...QLQAHQMSQLH.......PMNEMKI.RPGM..GVK.PGVFQQ
  663-  700 (50.80/30.88)	SVTGQRP.......AYPCQQLK.......LGSSFPIfSPQLlqAVS.PQIPQH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     127.05|      32|     726|     286|     324|       4
---------------------------------------------------------------------------
  286-  324 (51.04/43.13)	VVLDLSEssvsetwAGWRHIGMCKELKVLDLRRCDHLTE
  352-  371 (25.85/ 9.23)	...................VGKLKCLKYLNASGCIHIRE
 1016- 1045 (50.16/28.27)	IMLSMNE.......ANWNH..KVEVLKSLRLRQRQRVLE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      72.98|      21|      28|     916|     936|       8
---------------------------------------------------------------------------
  916-  936 (39.46/25.42)	FLLCRPQT.TLKPKIVFFIGNG
  945-  966 (33.52/20.50)	LILRNPNTyTLRRNIEFCLSEG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      90.90|      28|      39|     810|     842|       9
---------------------------------------------------------------------------
  810-  842 (37.28/32.94)	EYEDlsAKAKSRFSISLRRLSQLMSLKdiaRTW
  852-  879 (53.63/31.53)	EYAE..QSGGGSFSSNHRGLRNSQPHR...RCW
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP16838 with Med15 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) SSCQQAKQQQQQLPTQLQAHQMSQLHPMNEMKIRPGMGVKPGVFQQH
615
661










Molecular Recognition Features






MoRF SequenceStartStop




1) GTRKKKRESKIA
1098
1109