<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP16837

Description Uncharacterized protein
SequenceMVESKEGSSGSKRILPIFYDVSVDDVKLKTELYTKALSIHREKFSTDIVHQWEEALREAGKIKGWELKDKGHAEFAKAFVRKVSVELKVNKQYVTRSLVERIDEQDALISLLHLKSSHDVRLVWIHGMGGIGKTTLAKAVFNRLCDHFGGCCFLLDVLETTKRKGIDHLQRQLLQDLGVKSADISDENDGIQIISTQLQDRKVLVVLDDVHDQEQIGKLAGEAGWFGKGSRIIITSRNKNVPVFEGGRVEILEAESMKFEESLLLFSRKVQDRLKISYDALDCEAKKIFLDIACFFINEEKTKAIYMWQSCGFKPYLAVKELVDASLIKLADDKKFSMHDQLRDLGRKIVCDERLKDLGKPCSRIWMHEDALKVVREEEMCKELKVLDLKRCNHLTKMPDVSMCTKLERLILEGCSHLVEIDHSVGKLKCLKYLNTGDCPSLRKIPREVCCLDGLEDMVLTTEGYFQKILKLPDSIGRLSRLQRLRVSLGRTVLPSSLGRLKSLTMLVLSRSEIAELPESIGGLEQLEFLSLFFCKELKKLPNSIGNLKLLVELNISESGIVQLPDAVGNLPELKVIDMRGCDIRRLPDFLGNMEKLERLDVYDCEYLQDIPSAIKGITSSLKVSSSAWEKSCESYWEMKRRIKALKDLYLQDLNEMYQKFATKVQQYDSLPQQPKLEQLEKLKIFTVMLERLIAMLQVPKSEIHPGLKEKLPSYEKQIVQFLNSNRPRRQQGQLPPHHMPSRTTLFCKFEKKRQGGRRLGRYLERRTKFIIFGARSQTDRPLHLLLLPLLKLLLPLKSIFRSAGHRDHPSSASHPSTARGKDDTNPQASLSSDPDAAFLPYRSDDFLHFEMRHCLSSSPLSTAPLGTSVEHLHFNFLY
Length879
PositionTail
OrganismPunica granatum (Pomegranate)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Myrtales> Lythraceae> Punica.
Aromaticity0.07
Grand average of hydropathy-0.308
Instability index41.97
Isoelectric point8.83
Molecular weight100429.71
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ADP binding	GO:0043531	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP16837
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             9|     206.25|      21|      21|     564|     584|       1
---------------------------------------------------------------------------
  386-  408 (19.83/ 6.87)	VLDLK.RC..NhLtkMPD.VSMCTKLE
  409-  432 (22.64/ 8.80)	RLILE.GC.sH.LveIDHSVGKLKCLK
  433-  456 (20.70/ 7.47)	YLNTG.DC.pS.LrkIPREVCCLDGLE
  459-  483 (21.08/ 7.73)	VLTTE.GYfqK.IlkLPDSIGRLSRLQ
  484-  505 (23.54/ 9.42)	RLRVSlGR..T.V..LPSSLGRLKSLT
  506-  528 (24.93/10.38)	MLVLS.RS..E.IaeLPESIGGLEQLE
  529-  552 (21.54/ 8.05)	FLSLF.FC.kE.LkkLPNSIGNLKLLV
  553-  575 (24.92/10.37)	ELNIS.ES..G.IvqLPDAVGNLPELK
  576-  598 (27.07/11.85)	VIDMR.GC..D.IrrLPDFLGNMEKLE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      68.17|      20|      27|     721|     744|       2
---------------------------------------------------------------------------
  721-  744 (34.14/28.48)	QFlnsnRPRRQQGQLPPHHMPSRT
  749-  768 (34.03/18.85)	KF....EKKRQGGRRLGRYLERRT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     273.60|      64|     141|     152|     218|       3
---------------------------------------------------------------------------
  103-  133 (25.81/ 8.70)	.......................................DEQDAlISLLHLK.SSHDVRLVW..IHGMGGIGK
  152-  218 (96.38/60.76)	CFLLDvleTTKRKGIDHLQRQLLQD.LGVKS.AD...ISDENDG.IQIISTQLQDRKVLVVLDDVHDQEQIGK
  232-  285 (68.63/36.78)	III.....TSRNKNVPVFEGGRVEI.LEAES.MK...F...EES.LLLFSRKVQDR..LKISYDALDCEA...
  294-  360 (82.78/45.80)	CFFIN...EEKTKAIYMWQSCGFKPyLAVKElVDaslIKLADDK.KFSMHDQLRDLGRKIVCDE..RLKDLGK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.01|      11|      25|     772|     782|       4
---------------------------------------------------------------------------
  772-  782 (20.31/13.90)	IFGARSQTDRP
  800-  810 (21.70/15.37)	IFRSAGHRDHP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP16837 with Med15 domain of Kingdom Viridiplantae
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