<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP16837

Description Uncharacterized protein
SequenceMVESKEGSSGSKRILPIFYDVSVDDVKLKTELYTKALSIHREKFSTDIVHQWEEALREAGKIKGWELKDKGHAEFAKAFVRKVSVELKVNKQYVTRSLVERIDEQDALISLLHLKSSHDVRLVWIHGMGGIGKTTLAKAVFNRLCDHFGGCCFLLDVLETTKRKGIDHLQRQLLQDLGVKSADISDENDGIQIISTQLQDRKVLVVLDDVHDQEQIGKLAGEAGWFGKGSRIIITSRNKNVPVFEGGRVEILEAESMKFEESLLLFSRKVQDRLKISYDALDCEAKKIFLDIACFFINEEKTKAIYMWQSCGFKPYLAVKELVDASLIKLADDKKFSMHDQLRDLGRKIVCDERLKDLGKPCSRIWMHEDALKVVREEEMCKELKVLDLKRCNHLTKMPDVSMCTKLERLILEGCSHLVEIDHSVGKLKCLKYLNTGDCPSLRKIPREVCCLDGLEDMVLTTEGYFQKILKLPDSIGRLSRLQRLRVSLGRTVLPSSLGRLKSLTMLVLSRSEIAELPESIGGLEQLEFLSLFFCKELKKLPNSIGNLKLLVELNISESGIVQLPDAVGNLPELKVIDMRGCDIRRLPDFLGNMEKLERLDVYDCEYLQDIPSAIKGITSSLKVSSSAWEKSCESYWEMKRRIKALKDLYLQDLNEMYQKFATKVQQYDSLPQQPKLEQLEKLKIFTVMLERLIAMLQVPKSEIHPGLKEKLPSYEKQIVQFLNSNRPRRQQGQLPPHHMPSRTTLFCKFEKKRQGGRRLGRYLERRTKFIIFGARSQTDRPLHLLLLPLLKLLLPLKSIFRSAGHRDHPSSASHPSTARGKDDTNPQASLSSDPDAAFLPYRSDDFLHFEMRHCLSSSPLSTAPLGTSVEHLHFNFLY
Length879
PositionTail
OrganismPunica granatum (Pomegranate)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Myrtales> Lythraceae> Punica.
Aromaticity0.07
Grand average of hydropathy-0.308
Instability index41.97
Isoelectric point8.83
Molecular weight100429.71
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ADP binding	GO:0043531	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP16837
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             9|     206.25|      21|      21|     564|     584|       1
---------------------------------------------------------------------------
  386-  408 (19.83/ 6.87)	VLDLK.RC..NhLtkMPD.VSMCTKLE
  409-  432 (22.64/ 8.80)	RLILE.GC.sH.LveIDHSVGKLKCLK
  433-  456 (20.70/ 7.47)	YLNTG.DC.pS.LrkIPREVCCLDGLE
  459-  483 (21.08/ 7.73)	VLTTE.GYfqK.IlkLPDSIGRLSRLQ
  484-  505 (23.54/ 9.42)	RLRVSlGR..T.V..LPSSLGRLKSLT
  506-  528 (24.93/10.38)	MLVLS.RS..E.IaeLPESIGGLEQLE
  529-  552 (21.54/ 8.05)	FLSLF.FC.kE.LkkLPNSIGNLKLLV
  553-  575 (24.92/10.37)	ELNIS.ES..G.IvqLPDAVGNLPELK
  576-  598 (27.07/11.85)	VIDMR.GC..D.IrrLPDFLGNMEKLE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      68.17|      20|      27|     721|     744|       2
---------------------------------------------------------------------------
  721-  744 (34.14/28.48)	QFlnsnRPRRQQGQLPPHHMPSRT
  749-  768 (34.03/18.85)	KF....EKKRQGGRRLGRYLERRT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     273.60|      64|     141|     152|     218|       3
---------------------------------------------------------------------------
  103-  133 (25.81/ 8.70)	.......................................DEQDAlISLLHLK.SSHDVRLVW..IHGMGGIGK
  152-  218 (96.38/60.76)	CFLLDvleTTKRKGIDHLQRQLLQD.LGVKS.AD...ISDENDG.IQIISTQLQDRKVLVVLDDVHDQEQIGK
  232-  285 (68.63/36.78)	III.....TSRNKNVPVFEGGRVEI.LEAES.MK...F...EES.LLLFSRKVQDR..LKISYDALDCEA...
  294-  360 (82.78/45.80)	CFFIN...EEKTKAIYMWQSCGFKPyLAVKElVDaslIKLADDK.KFSMHDQLRDLGRKIVCDE..RLKDLGK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.01|      11|      25|     772|     782|       4
---------------------------------------------------------------------------
  772-  782 (20.31/13.90)	IFGARSQTDRP
  800-  810 (21.70/15.37)	IFRSAGHRDHP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP16837 with Med15 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




NANANA









Molecular Recognition Features






MoRF SequenceStartStop




1) LPIFY
15
19