<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP16816
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MAAELGQQTVEFSALVRRAAEDSYLSLKKLVEAYKAPEERSDSEKKIDLLKFIVKTRQRMLRLHVLSKWCLQVPLIQYCQQLAATLSSHDTCFTQTADSLFFMHEGLQQARAPIFDVPSSIEVLLTGGYSRLPKCIEDMGFQATLTDNQQKPALKKLEMVLRSKLLDVPIPKEISNVTVSDGTAVLCVDGEFKVYLTLGYRGYLHLWRILHLELLVGEKNEHVKLEETRRYALGDDLERRMAAAENPFMILYAFLHELCVSLVMDTVLRQVKILRLGRWKDAIRFELISDGITGQGVSSSVSQSAQDVELESSGQKVPGLKIVYWLDWEGNSAGPDSGVPPFIRIEQGQDLQIKCLHSTFVFDPITNKEAELSFDQSCIDVEKLLLRAIACNRHTRLLDIHRELSRNVQLCQVPGDVVLKHESAETNSCLRKFRFQEIASFPGSGGGVVESVGWLGFRDEGRLHASVGEEVLQVRAYGTSYITLRINIRNGRFLLQCSQNILAPSALLECEEALNLGSMTASEVFMSLRSKSILHLFASIGRSLGLKVYEHCLTTLKIPKPVLHGSDLLLMGLPQSGNSYYLLMQLDKDFRPLFNLLETQTESNGMSHAVGDVSHVVRFNKIDINEMLMVDDELNLSLLNSDKLNSLVFSSTSIQISECGLLHSGLEPALQTSEFSRSSFSSIVDEVFESNKDTSGNIVHSQSFSSSFSVPSFSHLNSLSNSNQGTKSGVVSSILDSSTPNFSKVSVVPFYPSGNSKVLLNAHSSSKPSFQKLSSSKSEQDLSSLKPPYSNQLGQFTAMDEDQTKLLTGSSSVIGGSHSGQLSSSLQAAVPRVAAPSSGVNGSKVSSYGHSVAVLRSTELNSLISTSLRQIPEFSLIHSSEHSGTPNKERASLKRSLADILKMMPSAKELEEDVRPLKRMKTLESSDSQGFSSFISSRTSKHTYGSLLAEGTHGIAPSNVYVSVLLHVVRHCSLCIKHARLTSQMDALDIPYVEEVGLRTSSSNLWIGLPFAQDSSWQHICLRLGKPGSMHWDVKINDLHFQELWELHRGSSSTPWGPGVRIANASDIDSHIHCDPEGVVLSYKTVETDSIQRLVSDLRRLSNARIFARDMRRLIGVRTDDKLDDSIANPDIKVQLQKSLTEPVDKLSEQMRRTFKIEAVGIMSLWFCYGSMPVTAHFVVEWEAGKVGCTMHVSPDHLWPHTKFLEDFINGGDVASFLDCIRLTAGPLLALAAAIPPARMSGPVSSGTPAPKQGSCIPSQGLAPNSSTSSAIVAATSGAPTGSSATAPFSSQSLLTAATLSAAGRCISGIVPSSLLPIDVSVVLRGPYWIRIIYRKRFAVDMRCFAGDQVWLQPATPPKGGPAAGGSLPCPQFRPFIMEHVAQGLNALEPNIPAGANSGCHTSLNNSTQNSGSQAMVANSSRSIPRSGIVIGNQMAGNLNRVGNSMMSSSGLNSGVSGVPVRLTPGTGVPMHVKGELNTAFIGLGDDGGYGGGWVPLAALKKVLRGILKYLGVLWLFAQLPDLLKEILGSILKENEGALLNLDQEQPALRFFVGGYVFAVSVHRVQLLLQVLSVKRFNHQQQQQTQTSAQEELSLPEISEICEYFSRRVASEPYDASRVASFITLLTLPVSVLREFLKLIAWKKGISQAHGGDLASAQRARIELCLENHMGSTYDENMDGSSVSKSNIHYDRSHNSVDFAVTFVLDPAHIPHVNAAGGAAWLPYCVSVRLKYAFGDSPHVSFLRMDGSHGGRSCWSRAEDWERCRQRLARAVEYANGNSMGDLTQGRLKLVVETLQKTLQASLQQLRDGST |
Length | 1811 |
Position | Tail |
Organism | Apostasia shenzhenica |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Asparagales> Orchidaceae>
Apostasioideae> Apostasia.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.115 |
Instability index | 49.53 |
Isoelectric point | 7.00 |
Molecular weight | 198166.76 |
Publications | PubMed=28902843
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP16816
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
4| 465.88| 118| 118| 594| 711| 1
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507- 592 (81.81/53.56) .....................................LLECEEALNLgSMTASEVFMSL.RSK.SI.LHLFASIGRSlGLkvyEHCL..TTLKIPKPVLH.G..S..DLLLMGL...PQSGNS..YYlLMQLDKDF..R.P
594- 711 (194.93/141.12) FNLLETQTESN.GM.SHAVGDV..SHVVRFNKIDINEMLMVDDELNL.SLLNSDKLNSLVFSSTSI.QISECGLLHS.GL...EPAL..QTSEFSRSSFS.SIVD..EVFESNK...DTSGNI..VH.SQSFSSSF..SVP
713- 831 (131.49/92.02) FSHLNSLSNSNqGTkSGVVSSIldSSTPNFSKVSVVPFYPSGN..SK.VLLNAHSSSKPSFQKLSS.SKSEQDL..S.SL...KPPYsnQLGQF.....T.AM.D..E..DQTKlltGSSSVIggSH.SGQLSSSLqaAVP
839- 909 (57.65/34.86) .................................GVNGSKVSSYGHSV.AVLRSTELNSLI..STSLrQIPEFSLIHS.SE...HSGT..PNKE..RASLKrSLADilKMMPSAK...E.......................
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 95.12| 20| 21| 1250| 1269| 2
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1250- 1269 (37.86/20.81) APKQGSCIPSQGLAPNSSTS
1274- 1293 (33.98/17.87) AATSGAPTGSSATAPFSSQS
1408- 1423 (23.29/ 9.79) ..TQNS..GSQAMVANSSRS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 133.17| 28| 118| 1221| 1249| 3
---------------------------------------------------------------------------
1221- 1248 (48.30/25.07) I.RLTAGPLLALAAAIPPARMSGPVSSGT
1342- 1367 (49.33/25.84) M.RCFAGDQVWLQPATPPK..GGPAAGGS
1377- 1403 (35.54/15.90) ImEHVAQGLNALEPNIPAGANSGCHTS..
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 84.18| 25| 118| 1030| 1092| 4
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328- 355 (41.65/11.66) WE...GNSAGPdSGvpPFIRIEQGQDL..QIKC
1045- 1074 (42.53/62.91) WElhrGSSSTP.WG..PGVRIANASDIdsHIHC
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 211.34| 72| 720| 945| 1032| 6
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945- 1032 (101.18/107.71) GSLLAEGTHGiapSNVYVSVlLH.vvrHCSlcIKHArLTSQMDALDIPYVEEVGlrtssSNLW......IGLPFAQDSSwQHIC.LRL.GKPGSMH.W
1671- 1755 (110.16/68.59) GSTYDENMDG...SSVSKSN.IHydrsHNS..VDFA.VTFVLDPAHIPHVNAAG.....GAAWlpycvsVRLKYAFGDS.PHVSfLRMdGSHGGRScW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 70.58| 20| 71| 290| 309| 7
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290- 309 (34.30/23.13) DGITGQGVSSSVSQSAQDVE
363- 382 (36.28/24.94) DPITNKEAELSFDQSCIDVE
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