<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP16766
Description |
Mediator of RNA polymerase II transcription subunit 5 |
Sequence | MFFAYNLVQTRPVMTDDMAVEYLEKLQHIQVSCDHEFYVELWMSALTGLAEECDKTSTGRVQHTLLWKSFVLVKLPSLIEKLELKKSNKFKNGNLLYSEENKYDCHECVINQLFGFKGLINACNQLVEDDIFQAADITVDILRVCLNRKLVRKEFVNRFLELEYEIDGGDTVGLTAGNILDDPSRQIIDHLVSTATTSFLHQESRVETIFKLMSEWSTKLEVAPLATLCRSLMDVPTLLDIIHLYRHPSEFISSLERLCNTWVSKADSKESLLHDYENFGTIFLFLISVIDRYEFHKNIKDVLHDDEGFCYKWLIQSGSTYDIDSLDQEKSIITRLVSTLSDASQEIPEDLIRISPRSLIELSPTIFKEALKKVVTEDIEIAMINLEPLFTHFVKPHMSYALIGVCQSLCDDILFKGKSSISFKVLNRLILEEAFPNSIIKLIGNKLLSIFDIISENGSLPSIEDTENIIRNKIAKIMMVPNWRNTKHPAEKLYYRFKMMFKSIIYGGRHKPSLIYEIFLSENYFNNDINTEYEYITGNGGAANNLFDEFIINPSSWLGPHHLDIELFRNCLEINGPRTFVDLIVEEVLSAGKKGMGIRAAELGASLLTLPIYYTWNEYLHPKTLIKIFFMDFLPSILEKKIDMYTQSYSIGIMTLSILMMIKKDTQNVGGVDVSIDEIVGINNNVDGTNDILMMDAIISEERIGGMEGVGGTKVEIEDFTKFVLSIFKQDRDNADSDNIDSKVIQNGSKKIDDKVKNESEPKLINGPAKGFIDALLIHEDIVPELKSLVNK |
Length | 792 |
Position | Tail |
Organism | Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) (Arbuscular mycorrhizal fungus) (Glomus intraradices) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Fungi incertae sedis> Mucoromycota> Glomeromycotina>
Glomeromycetes> Glomerales> Glomeraceae> Rhizophagus.
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Aromaticity | 0.09 |
Grand average of hydropathy | -0.072 |
Instability index | 38.68 |
Isoelectric point | 5.06 |
Molecular weight | 90314.99 |
Publications | PubMed=30271968
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Function
Annotated function |
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
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GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP16766
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 135.41| 43| 189| 544| 587| 1
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111- 161 (55.72/32.94) NQLFGfKGLINACNQLVEDDIfqaaDItvDILRVCLNRKLVRkEFVNRFLE
544- 586 (79.70/56.66) NNLFD.EFIINPSSWLGPHHL....DI..ELFRNCLEINGPR.TFVDLIVE
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 260.04| 87| 115| 163| 257| 2
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163- 257 (134.59/114.49) EYEIDGgdTVGLTAGNILD..DPSRQIID..HLVSTATTSFLHQESRVETIFKLMSEWS..TKLevapLATLCRSLMDVPTllDIIHLY.R.....HPSEFISSLER
275- 373 (125.45/85.54) DYENFG..TIFLFLISVIDryEFHKNIKDvlHDDEGFCYKWLIQSGSTYDIDSLDQEKSiiTRL....VSTLSDASQEIPE..DLIRISpRslielSPTIFKEALKK
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 57.91| 16| 433| 65| 92| 3
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66- 81 (28.72/36.17) LWKSFVLVKLPSLIEK
625- 640 (29.19/ 6.77) LIKIFFMDFLPSILEK
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