<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP16736

Description Uncharacterized protein
SequenceMKIESKALAILLLFAFEFSLALAAADDATKLGTVIGIDLGTTYSCVGVYRNGRVEIIANDQGNRITPSWVAFTDTERLIGEAAKNQAALNAERTVFDVKRLIGRKFDDPEVQRDIKFLPYKIVNKGGKPYIQVKVKGETKVFSPEEISAMILQKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEMNILVYDLGGGTFDVSILTIDNGVFEVLATSGDTHLGGEDFDHRVMDYFIKLIKKKYNKDISKDNKAIGKLRRECERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNMDLFKKTMGPVKKALEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDLFDGKEPSKGINPDEAVAHGAAVQGGILSGEGGDETKGILLLDVAPLSLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQSTVTIKVYEGERSLTKDCRELGRFDLSGIPPAPRGVPQIEVTFEVDANGILHVTAEDKGAKNKQSITITNDKGRLSQEEIDRMVKEAEEFAEEDKKVRERVDSRNKLETYIYNMRSTINDKLADKIDSDDKERIESTLKEALEWLDDNQNAEKDDFDEKMKEVEAVCNPVIKQVYEKNGGSSSADSEDEEPNDEL
Length657
PositionUnknown
OrganismCitrus unshiu (Satsuma mandarin) (Citrus nobilis var. unshiu)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Sapindales> Rutaceae> Aurantioideae> Citrus.
Aromaticity0.06
Grand average of hydropathy-0.432
Instability index32.84
Isoelectric point5.19
Molecular weight72699.73
Publications
PubMed=29259619

Function

Annotated function 
GO - Cellular Component
endoplasmic reticulum	GO:0005783	IEA:UniProtKB-KW

GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP16736
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      64.14|      20|      22|     576|     597|       1
---------------------------------------------------------------------------
  516-  537 (17.05/ 6.69)	...TAEDKGAKNKQSititNDKGRL
  552-  568 (18.10/ 6.27)	F.AEEDKKVRERVDS....RNK...
  576-  596 (28.99/15.87)	MrSTINDKLADKIDS....DDKERI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.56|      18|      22|     101|     122|       2
---------------------------------------------------------------------------
  101-  122 (27.01/29.07)	LIGRkfddPEVQRDIK.....FLPYKI
  125-  147 (26.55/16.38)	KGGK....PYIQVKVKgetkvFSPEEI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.08|      14|      15|     412|     425|       3
---------------------------------------------------------------------------
  412-  425 (23.58/16.46)	GDETKGILLLDVAP
  429-  442 (24.49/17.39)	GIETVGGVMTKLIP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP16736 with Med37 domain of Kingdom Viridiplantae
Unable to open file!