<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP16724
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MGELGQQTVPFSTLVSRAAEDSFASLKELVEKSKTGEEYDTDKKINLLKYIVKTQQRMLRLNVLAKWCQQVPLIHYSQQLASTLSSHDTCFTQAADSLFFMHEGLQQARAPIYDVPSAIEVFLTGSYQRLPKCIEDMGMQSTLTKDQQKAALKKLDTLVRAKLLEVSLPKEISEVKVSSGTALLRVDGEFKALVTLGYRGHLSMWRILHLELLVGERSGPVKLEESRRHVLGDDLERRMSAADNPFITLYSILHELCVALVMDTVIRQVQALRQGRWKDAIRFELISDGSMGHGASGSSIQPNQDGEVDSAGLRTPGLKLIYWLDFDKNPGSSDSGSCPFIKIEPGPDLQIKCLHSSFVIDPLTGKEAEFALDQSCIDVEKLLLRAISCNRYTRLLEIQKELGKNIQICRAPSDVVLQSFMDELDADNRKKDNKSEFRDYEGQEVLRVRAYGSSFFTLGINIRNGRFLLQSSHKVLAPSVLSDCEEALNQGSTSAAEVFISLRSKSILHLFAAIGRFLGLEVYDHGFASMKVPKNLVNGSTVLLMGFPDCGSSYFLLMELDKDFKPMFKLVETQPDQSEKGQSSSDLNRVIRIKQIDISQMQILEDELNLSILNQGNLLSVMPNADGANHTSEQGLISEFNLDGSMHLAGCPLSSFSSVVDEVFEFEKGPAASSYTLQNVSSSFTTSSASHFGSLQMNLHGVKAGTPSPRWEGGVQMSHLNVAKGSIGNTQYNGSLYSSSNVKGPVQSSSFSSLSSGLARSTAVKKLPASKSDQDLASLRSPHSIEIGTVEEDLVSVGRSSRLLSPPRTASVRAPPPSAKPNGPRSSVTGSLAGSIKVAGSSSLASPPVSHAADTDIVSKHDKHPQKRTVSDMLSLIPSLQDIEAATGLSNKRRKISESAHFQQPLSGGLISAEIVSKAERYSYGNLVAEANKGNAPSSIYISALLHVVRHCSLCIKHARLTSQMELLDIPYVEEVGLRSASSNIWFRLPFARGYTWRHICLRLGRPGSMHWDVKINDQHFRDLWELQKGSNSTPWGSGVRIANTSDIDSHIRFDPEGVVLSYQSVEDDSIKKLVADIQRLANARMFALGMRKLLGVRADEKPEEGTANFDVKAPVGGKGASEASDKLSEQMKRAFRIEAVGLMSLWFSFGSVVLARFVVEWESGKEGCTMHVSPDQLWPHTKCSFITDMHANNMPTLCCIEQFLEDFINGAEVASLLDCIRLTAGPLHALGAATRPARAGTGPGVPGVATAVSTIPKQTGYSSSQGLLPNGSTTNVSQVTSAPTGLNVSQVTSASTGNPVGAASTVPLGNPNLHGAAMLAAAGRGGPGIVPSSLLPIDVSVVLRGPYWIRIIYRKHFAVDMRCFAGDQVWLQPATPPKGGPSVGGSLPCPQFRPFIMEHVAQELNGLDSNITGGQQTVGMANTNPSSGSQLASANGSRVNIPSSAAMSRAVNQVAALNRVGNPMPGSSNLSVVSSGLPIRRSPGASVPAHVRGELNTAIIGLGDDGGYGGGWVPLVALKKVLRGILKYLGVLWLFAQLPDLLKEILGSILKDNEGALLNLDQEQPALRFFVGHYPKLGGLRIVWKDIGYFNTLKKDFAIINSWRNEIGGKLSTEVGYVRGYVFAVSVHRVQLLLQVLSVKRFHQQQQQQQQQNSSTAQEELTQSEIGEICDYFSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKGLAQTQGGEIAPSQKPRIELCLENHSGFNVDDGSVNSSASKSNIHYDRPHNSVDFALTVVLDPAHIPHINAAGGAAWLPYCVSVRLRYSFGENPNVSFLGMEGSHGGRACWLRTDEWEKCKQRVARVVEVNPVSAGDLTQGRLRIVADSVQRTLHMCLQGLKDGGTVTASSVGV |
Length | 1887 |
Position | Tail |
Organism | Citrus unshiu (Satsuma mandarin) (Citrus nobilis var. unshiu) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> malvids> Sapindales> Rutaceae> Aurantioideae> Citrus.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.163 |
Instability index | 45.43 |
Isoelectric point | 8.16 |
Molecular weight | 204890.97 |
Publications | PubMed=29259619
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP16724
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 40.09| 11| 14| 1310| 1320| 1
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1310- 1320 (20.42/10.03) GNPNLHGAAML
1326- 1336 (19.66/ 9.36) GGPGIVPSSLL
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 264.27| 69| 162| 960| 1031| 2
---------------------------------------------------------------------------
960- 1031 (122.77/97.85) RLTSQMELLDIPYVEEVGLRSASSNIWFRLPFARGYT..WRHIC.LRLG.RP..G.SMHWDVKINDQHfrdLWELQKGS
1053- 1113 (57.17/35.76) RFDPEGVVLSYQSVEDDSIKKLVADIQ.RLANARMFAlgMRKLLgVRADeKPeeG.TANFDVK................
1128- 1185 (84.32/58.26) .LSEQMK..RAFRIEAVGLMS....LWF..SFGSVVL..ARFVVeWESG.KE..GcTMH....VSPDQ...LWPHTKCS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 133.16| 41| 162| 1263| 1305| 3
---------------------------------------------------------------------------
1263- 1305 (65.76/44.87) SSSQGLLPNGSTTNVSqvTSAPTGLNVSQVTS.ASTGNPVGAAS
1428- 1469 (67.40/40.22) SGSQLASANGSRVNIP..SSAAMSRAVNQVAAlNRVGNPMPGSS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 302.10| 97| 162| 329| 488| 4
---------------------------------------------------------------------------
329- 429 (157.07/87.71) NPGSSdSGSCPFIKIEPGPDLQIKCLHSSFV.IDPLTGKEAEFALDQSCIDVEKLLLRAI.SC.NRYTRLLEIQKELGKNIQICRAPSDvvlQSFMDELDAD.NR
489- 589 (145.02/134.93) NQGST.SAAEVFISLRSKSILHLFAAIGRFLgLEVYDHGFASMKVPKNLVNGSTVLLMGFpDCgSSYFLLMELDKDFKPMFKLVETQPD...QSEKGQSSSDlNR
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 89.34| 26| 1448| 286| 311| 6
---------------------------------------------------------------------------
286- 311 (47.22/25.28) ISDGSMGHGASGSSIQPNQ.DGEVDSA
1743- 1769 (42.12/21.77) VDDGSVNSSASKSNIHYDRpHNSVDFA
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 78.57| 27| 1448| 127| 156| 7
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127- 156 (35.06/33.85) YQRLPKCIEDMgMQSTLtKDQQkAALKKLD
1536- 1562 (43.51/26.29) FAQLPDLLKEI.LGSIL.KDNE.GALLNLD
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---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 126.17| 35| 583| 796| 830| 8
---------------------------------------------------------------------------
723- 745 (28.19/10.46) ..................AKGSIGNTQYNG.......SLYSSSNVKGP
759- 806 (43.34/19.99) ARSTAVKKLPASksdqdlASLRSPHSIEIGtveedlvSVGRSSRLLSP
807- 847 (54.63/27.09) PRTASVRAPPPS......AKPNGPRSSVTG.slagsiKVAGSSSLASP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 134.62| 37| 1307| 166| 205| 11
---------------------------------------------------------------------------
166- 205 (59.59/38.57) VS..LPkeiSEVKVSSGTAL.LRVDGEFK.ALVTLGYRGHL.SMW
435- 459 (29.52/11.45) .........SEFRDYEGQEV.LRVRAYGS.SFFTLG.........
1474- 1513 (45.51/22.73) VSsgLP.....IRRSPGASVpAHVRGELNtAIIGLGDDGGYgGGW
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---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 48.69| 14| 15| 626| 640| 12
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626- 640 (21.80/17.74) DGANHTSEQGLiSEF
643- 656 (26.89/17.11) DGSMHLAGCPL.SSF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 44.02| 13| 17| 1222| 1235| 14
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1222- 1235 (19.22/ 9.77) RLTAGPlHALGAAT
1239- 1251 (24.80/ 9.56) RAGTGP.GVPGVAT
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