<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP16723

Description Uncharacterized protein
SequenceMARDNDQSKFIDSSDFLTVLASEGVEFLLSRQGKVPLSSCGGKTICLFFSANWCRPCKTFTPQLVQLYDTLRTRGTELEVIFISFDHDENGFEEHFKCMPWLAVPFDETLHKKLRIRYRVDRIPSLIPLASDGTLIEEDLIGLIEDYGADAYPFTRKRREELKAIDDSKRQGGKLEQLLAIEGRDYVLSRDHRKITVSELAGKTIGLYFGAHWCPPCRSFTSQLIEVYDKLKTTANHCFEVVLVSTDRDHKEFDLNHSIMPWLAIPYEDRARQDLCRIFNIKGIPALVLIGPDGKTISTNGKEMISLYGAKAFPFTESRIAEIETALKKEGDALPREVKDVKHEHELKLDMAKAYVCDCCKMRGRFWAFSCDVCNYDLHPKCVEGINLNLFCWEIKEVERVEMWMHRNNSGEKKEAKSCGLTAVAIDRDKGSQNAIKWAIDNILTKGQTLVLIHVKIRSASLSPSPSLISPNPDPQTREIFLPFRCFCTRKDIQCKDVVLEDTDVAKALIEYVSQTAIETLVVGASNNKGFLRRFKTTDVPGNVSKGAPDFCTVYVISKGKISSMRSASRPAPAVSPLRNQIIIRPPQPERPAPQPPPIRVPTPTERPQMEPPRKSNDDAEFFRSPFTRKQFNGKQGGEQRAAPPHDTDISFVSSGRPSIDRIFPAFFDNIENSANRTPPRLSNLSDMESNNSFESMQIGRRSLDIGSPSGFSSASGENDRSSSASQGLDDVEAEMRRLRLELKQTMEMYSTACKEALTAKQKATELQRWKLEEQQRLEEARLAEEAAMAIAEKEKVKSRAAIEAAEAAQRIAELESQKRISAEMKALKEAEEKKKALDALANSDVRYRKYSIEEIEAATEFFTDTRKIGEGGYGPVYKCYLDHTPVAIKVLRPDAAQGRSQFQQEVEILSCIRHPNMVLLLGACPEYGCLVYEFMANGSLEDRLMRRGQSPPLSWQLRFKIAAEIGTALLFLHQTKPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPSVADNVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDVYSLGIMFLQIITGKPPMGLTHHVERAIEKGTFEEMLDPTVPDWPVEDALSFAQLALKCAELRRKDRPDLGKVVLAELNRLRALAEETVNPPLFVGGQSPNHSQVSLQLESMTSNPNLPQSDASSKNLSMT
Length1179
PositionTail
OrganismCitrus unshiu (Satsuma mandarin) (Citrus nobilis var. unshiu)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Sapindales> Rutaceae> Aurantioideae> Citrus.
Aromaticity0.07
Grand average of hydropathy-0.407
Instability index51.14
Isoelectric point6.55
Molecular weight132453.96
Publications
PubMed=29259619

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP16723
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     547.09|     155|     158|      20|     177|       1
---------------------------------------------------------------------------
   20-  177 (277.71/191.70)	LASEGVEFLLSR.QGKVPLSSCGGKTICLFFSANWCRPCKTFTPQLVQLYDTLRTRGTE.LEVIFISFDHDENGFEEHFKCMPWLAVPFDETLHKKL.RIrYRVDRIPSLIPLASDGTLIEEDLIGLIEDYGADAYPFTRKRREELKAidDSKRQGGKLEQ
  179-  336 (269.38/175.95)	LAIEGRDYVLSRdHRKITVSELAGKTIGLYFGAHWCPPCRSFTSQLIEVYDKLKTTANHcFEVVLVSTDRDHKEFDLNHSIMPWLAIPYEDRARQDLcRI.FNIKGIPALVLIGPDGKTISTNGKEMISLYGAKAFPFTESRIAEIET..ALKKEGDALPR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      75.43|      24|     471|     530|     556|       3
---------------------------------------------------------------------------
  530-  556 (36.94/38.96)	GfLRRFKTTDVPGNVSK.....GAPDFCtvYV
 1005- 1033 (38.48/26.82)	G.LARLVPPSVADNVTQyrmtsTAGTFC..YI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.00|      14|      16|     774|     788|       4
---------------------------------------------------------------------------
  774-  788 (18.50/17.82)	EQQRLeEARLAEEAA
  793-  806 (20.50/13.76)	EKEKV.KSRAAIEAA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      90.83|      27|     471|     665|     691|       5
---------------------------------------------------------------------------
  665-  691 (46.87/30.68)	PAFFDNIENSANRTPPRLSNLSDMESN
  709-  735 (43.96/28.29)	PSGFSSASGENDRSSSASQGLDDVEAE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     118.52|      40|     388|     477|     521|       7
---------------------------------------------------------------------------
  477-  521 (56.59/39.89)	TREI....FLP.FRCFCTRKDIQCKdvVLEdTDVAKALIEYvsQTAIETL
  866-  910 (61.93/29.91)	TRKIgeggYGPvYKCYLDHTPVAIK..VLR.PDAAQGRSQF..QQEVEIL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      73.00|      20|     193|     936|     955|       9
---------------------------------------------------------------------------
  936-  955 (36.33/23.50)	MANGSLEDRLMRRGQSPPLS
 1132- 1151 (36.67/23.79)	LAEETVNPPLFVGGQSPNHS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      38.12|      11|      41|     651|     661|      10
---------------------------------------------------------------------------
  651-  661 (21.42/12.12)	SFVSS..GRPSID
  693-  705 (16.71/ 7.87)	SFESMqiGRRSLD
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP16723 with Med32 domain of Kingdom Viridiplantae
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