<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP16722

Description Uncharacterized protein
SequenceMARDNDQSKFIDSSDFLTVLASEGVEFLLSRQGKVPLSSCGGKTICLFFSANWCRPCKTFTPQLVQLYDTLRTRGTELEVIFISFDHDENGFEEHFKCMPWLAVPFDETLHKKLRIRYRVDRIPSLIPLASDGTLIEEDLIGLIEDYGADAYPFTRKRREELKAIDDSKRQGGKLEQLLAIEGRDYVLSRDHRKITVSELAGKTIGLYFGAHWCPPCRSFTSQLIEVYDKLKTTANHCFEVVLVSTDRDHKEFDLNHSIMPWLAIPYEDRARQDLCRIFNIKGIPALVLIGPDGKTISTNGKEMISLYGAKAFPFTESRIAEIETALKKEGDALPREVKDVKHEHELKLDMAKAYVCDCCKMRGRFWAFSCDVCNYDLHPKCEVERVEMWMHRNNSGEKKEAKSCGLTAVAIDRDKGSQNAIKWAIDNILTKGQTLVLIHVKIRSASLSPSPSLISPNPDPQTREIFLPFRCFCTRKDIQCKDVVLEDTDVAKALIEYVSQTAIETLVVGASNNKGFLRRFKTTDVPGNVSKGAPDFCTVYVISKGKISSMRSASRPAPAVSPLRNQIIIRPPQPERPAPQPPPIRVPTPTERPQMEPPRKSNDDAEFFRSPFTRKQFNGKQGGEQRAAPPHDTDISFVSSGRPSIDRIFPAFFDNIENSANRTPPRLSNLSDMESNNSFESMQIGRRSLDIGSPSGFSSASGENDRSSSASQGLDDVEAEMRRLRLELKQTMEMYSTACKEALTAKQKATELQRWKLEEQQRLEEARLAEEAAMAIAEKEKVKSRAAIEAAEAAQRIAELESQKRISAEMKALKEAEEKKKALDALANSDVRYRKYSIEEIEAATEFFTDTRKIGEGGYGPVYKCYLDHTPVAIKVLRPDAAQGRSQFQQEVEILSCIRHPNMVLLLGACPEYGCLVYEFMANGSLEDRLMRRGQSPPLSWQLRFKIAAEIGTALLFLHQTKPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPSVADNVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDVYSLGIMFLQIITGKPPMGLTHHVERAIEKGTFEEMLDPTVPDWPVEDALSFAQLALKCAELRRKDRPDLGKVVLAELNRLRALAEETVNPPLFVGGQSPNHSQVSLQLESMTSNPNLPQSDASSKNLSMT
Length1165
PositionTail
OrganismCitrus unshiu (Satsuma mandarin) (Citrus nobilis var. unshiu)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Sapindales> Rutaceae> Aurantioideae> Citrus.
Aromaticity0.07
Grand average of hydropathy-0.418
Instability index51.47
Isoelectric point6.65
Molecular weight130794.01
Publications
PubMed=29259619

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP16722
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     547.09|     155|     158|      20|     177|       1
---------------------------------------------------------------------------
   20-  177 (277.71/198.74)	LASEGVEFLLSR.QGKVPLSSCGGKTICLFFSANWCRPCKTFTPQLVQLYDTLRTRGTE.LEVIFISFDHDENGFEEHFKCMPWLAVPFDETLHKKL.RIrYRVDRIPSLIPLASDGTLIEEDLIGLIEDYGADAYPFTRKRREELKAidDSKRQGGKLEQ
  179-  336 (269.38/182.43)	LAIEGRDYVLSRdHRKITVSELAGKTIGLYFGAHWCPPCRSFTSQLIEVYDKLKTTANHcFEVVLVSTDRDHKEFDLNHSIMPWLAIPYEDRARQDLcRI.FNIKGIPALVLIGPDGKTISTNGKEMISLYGAKAFPFTESRIAEIET..ALKKEGDALPR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      36.96|      10|      15|     673|     682|       2
---------------------------------------------------------------------------
  673-  682 (18.35/11.27)	DMESNNSFES
  691-  700 (18.61/11.53)	DIGSPSGFSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.89|      12|      15|     572|     583|       5
---------------------------------------------------------------------------
  572-  583 (27.62/12.02)	PPQPERPAPQPP
  588-  599 (25.27/10.43)	PTPTERPQMEPP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.00|      14|      16|     760|     774|       6
---------------------------------------------------------------------------
  760-  774 (18.50/17.64)	EQQRLeEARLAEEAA
  779-  792 (20.50/13.68)	EKEKV.KSRAAIEAA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      96.22|      31|      71|     719|     750|       8
---------------------------------------------------------------------------
  719-  750 (47.89/42.31)	EAEMRRLRLELKQTMEMYSTACKEAlTAKQKA
  793-  823 (48.33/37.15)	EAAQRIAELESQKRISAEMKALKEA.EEKKKA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      73.00|      20|     193|     922|     941|       9
---------------------------------------------------------------------------
  922-  941 (36.33/19.31)	MANGSLEDRLMRRGQSPPLS
 1118- 1137 (36.67/19.55)	LAEETVNPPLFVGGQSPNHS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP16722 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) IFPAFFDNIENSANRTPPRLSNLSDMESNNSFESMQIGRRSLDIGSPSGFSSASGENDRSSSASQGLDDVEAEMRR
2) RSASRPAPAVSPLRNQIIIRPPQPERPAPQPPPIRVPTPTERPQMEPPRKSNDDAEFFRSPFTRKQFNGKQGGEQRAAPPHDTDISFVSSG
649
552
724
642










Molecular Recognition Features






MoRF SequenceStartStop




1) RIFPAFFD
648
655