<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP16721

Description Uncharacterized protein
SequenceMQEFEPLLSYLCGSNSNHLTSRPYYPTQLSRSVFTTLSLNPLISSPSFTGIFSSRATSGYQLQLVVLMARDNDQSKFIDSSDFLTVLASEGVEFLLSRQGKVPLSSCGGKTICLFFSANWCRPCKTFTPQLVQLYDTLRTRGTELEVIFISFDHDENGFEEHFKYGTLIEEDLIGLIEDYGADAYPFTRKRREELKAIDDSKRQGGKLEQLLAIEGRDYVLSRDHRKITVSELAGKTIGLYFGAHWCPPCRSFTSQLIEVYDKLKTTANHCFEVVLVSTDRDHKEFDLNHSIMPWLAIPYEDRARQDLCRIFNIKGIPALVLIGPDGKTISTNGKEMISLYGAKAFPFTESRIAEIETALKKEGDALPREVKDVKHEHELKLDMAKAYVCDCCKMRGRFWAFSCDVCNYDLHPKCVEGINLNLFCWEIKEVERVEMWMHRNNSGEKKEAKSCGLTAVAIDRDKGSQNAIKWAIDNILTKGQTLVLIHVKIRSASLSPSPSLISPNPDPQTREIFLPFRCFCTRKDIQCKDVVLEDTDVAKALIEYVSQTAIETLVVGASNNKGFLRRFKTTDVPGNVSKGAPDFCTVYVISKGKISSMRSASRPAPAVSPLRNQIIIRPPQPERPAPQPPPIRVPTPTERPQMEPPRKSNDDAEFFRSPFTRKQFNGKQGGEQRAAPPHDTDISFVSSGRPSIDRIFPAFFDNIENSANRTPPRLSNLSDMESNNSFESMQIGRRSLDIGSPSGFSSASGENDRSSSASQGLDDVEAEMRRLRLELKQTMEMYSTACKEALTAKQKATELQRWKLEEQQRLEEARLAEEAAMAIAEKEKVKSRAAIEAAEAAQRIAELESQKRISAEMKALKEAEEKKKALDALANSDVRYRKYSIEEIEAATEFFTDTRKIGEGGYGPVYKCYLDHTPVAIKVLRPDAAQGRSQFQQEVEILSCIRHPNMVLLLGACPEYGCLVYEFMANGSLEDRLMRRGQSPPLSWQLRFKIAAEIGTALLFLHQTKPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPSVADNVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDVYSLGIMFLQIITGKPPMGLTHHVERAIEKGTFEEMLDPTVPDWPVEDALSFAQLALKCAELRRKDRPDLGKVVLAELNRLRALAEETVNPPLFVGGQSPNHSQVSLQLESMTSNPNLPQSDASSKNLSMT
Length1212
PositionTail
OrganismCitrus unshiu (Satsuma mandarin) (Citrus nobilis var. unshiu)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Sapindales> Rutaceae> Aurantioideae> Citrus.
Aromaticity0.08
Grand average of hydropathy-0.392
Instability index51.08
Isoelectric point6.46
Molecular weight135913.59
Publications
PubMed=29259619

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP16721
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     593.66|     189|     470|     537|     752|       1
---------------------------------------------------------------------------
  537-  752 (290.75/209.93)	DVAKALIeYVSQTAIETLV...............VGASNNKGfLRRFKTTDVPGNVSK.....GAPDFCtvYVISKGKISSMRSASRPAPAVSPLRNQIIIRPPQPERPAPQPPPIRVPTPTERPQMEPPRKSNDDAEFFrspftrKQFNGKQGGEQRaapphdtdisfvsSGRPSIDRIFPAFFDNIENSANRT..PPRLsnLSDMESNNSFESMQIGRRSLDIGSPSgfSSASGEN
  998- 1208 (302.91/164.82)	EIGTALL.FLHQTKPEPLVhrdlkpanilldrnfVSKISDVG.LARLVPPSVADNVTQyrmtsTAGTFC..YIDPEYQQTGMLGIKSDVYSLGIMFLQIITGKPPMGLTHHVERAIEKGTFEEMLDPTVPDWPVEDALSF......AQLALKCAELRR.............KDRPDLGKVVLAELNRLRALAEETvnPPLF..VGGQSPNHSQVSLQLESMTSNPNLPQ..SDASSKN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     310.03|      87|     124|      73|     160|       2
---------------------------------------------------------------------------
   73-  160 (158.49/89.99)	DQSKFiDSSDFLTVLASEGVEFLLSR.QGKVPLSSCGGKTICLFFSANWCRPCKTFTPQLVQLYDTLRTRGTE.LEVIFISFDHDENGFE
  199-  287 (151.54/82.37)	DDSKR.QGGKLEQLLAIEGRDYVLSRdHRKITVSELAGKTIGLYFGAHWCPPCRSFTSQLIEVYDKLKTTANHcFEVVLVSTDRDHKEFD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.65|      16|     470|      37|      52|       3
---------------------------------------------------------------------------
   37-   52 (30.27/17.74)	LSLNP.LIS...SPSFTGIF
  495-  514 (21.37/10.30)	LSPSPsLISpnpDPQTREIF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.00|      14|      16|     807|     821|       4
---------------------------------------------------------------------------
  807-  821 (18.50/17.85)	EQQRLeEARLAEEAA
  826-  839 (20.50/13.83)	EKEKV.KSRAAIEAA
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP16721 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) IFPAFFDNIENSANRTPPRLSNLSDMESNNSFESMQIGRRSLDIGSPSGFSSASGENDRSSSASQGLDDVEAEMRR
2) RSASRPAPAVSPLRNQIIIRPPQPERPAPQPPPIRVPTPTERPQMEPPRKSNDDAEFFRSPFTRKQFNGKQGGEQRAAPPHDTDISFVSSG
696
599
771
689










Molecular Recognition Features






MoRF SequenceStartStop




1) RIFPAFFD
695
702