<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP16697

Description Uncharacterized protein (Fragment)
SequenceIFWMTLVKSFSKTKKSSANAITANAITAVAIDADKSSQYAVKWAVDNLLNETSQYVLLHVRNHSSNPQELEASSIGGRPATNDELQKLFLPYRGLFARKRILAREVVLQDIDVSSALIYYVKNNSVGNIVAGGSSRNLLTRKFRNLDLPSSLLKSAPESCAVYIISSKGKIQSSRPAASQPQMPSGDALIPKQPPLGERPSVIQPDSPRSVEIGRSDYSCDSSISKVTDRNYSSTDNSQKAKNGKSESTFPIVSSILPADSHMQNSFNSESESDISDFSVPVSYQSTEISENIDFSSLSKSSKDHFPQSPKGLEAEIKRLRLELKQSMEIYNSVSKEAVSTSQTAVKLQQRKKEEALKLEEARLAEEAALALVKSERQKTRAAMEAALMAQRLVELEAMKREIAELKAMQEEEEKKIVMEAMAYKNVRYRKYTIEEIEAATDYFSISRKIGEGGYGPVYKAQLDHTSVAIKVLGPDISQGPRQFKQEVEILGSMRHPNMVILLGACPEYGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLASVVLPELIRLRDLGFENAENKNDNIVVTPGPYNSVSEMKQVSGNNMRNH
Length749
PositionTail
OrganismCitrus unshiu (Satsuma mandarin) (Citrus nobilis var. unshiu)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Sapindales> Rutaceae> Aurantioideae> Citrus.
Aromaticity0.06
Grand average of hydropathy-0.360
Instability index50.37
Isoelectric point6.96
Molecular weight83030.53
Publications
PubMed=29259619

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP16697
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     111.45|      41|     291|     380|     447|       1
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  337-  378 (59.18/51.97)	EAVSTSQTAVKLQQRKKEEA.LKL....EEARLAEEA.ALALVKsERQ
  385-  431 (52.27/87.56)	EAALMAQRLVELEAMKREIAeLKAmqeeEEKKIVMEAmAYKNVR.YRK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     322.15|     101|     594|      35|     137|       2
---------------------------------------------------------------------------
   35-  137 (162.02/123.54)	KSSQYAVKWAVDNLLNETSQYVLLH.....VRNHSSNpqELEASSIGGRPATND.ELQKLFLPYRGLFARKRILAREVVLQDIDVSSALIYYVKNNSVGNIVAGGSSRN
  627-  733 (160.14/114.98)	KSDLYSLGVVLLQLITARPAMGLSHqveqaIRNGTFS..ELLDPTVTGWPVEAAlSIAKLALQCCELRKRDRPDLASVVLPELIRLRDLGFENAENKNDNIVVTPGPYN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      40.48|      10|      23|     175|     184|       3
---------------------------------------------------------------------------
  175-  184 (20.51/13.82)	RPAASQPQMP
  199-  208 (19.97/13.23)	RPSVIQPDSP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      97.74|      31|      57|     216|     251|       4
---------------------------------------------------------------------------
  216-  246 (53.30/44.65)	SDYSCDSSI..SKVTDR.NYSSTDNSQKAKNGKS
  276-  309 (44.43/24.10)	SDFSVPVSYqsTEISENiDFSSLSKSSKDHFPQS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      62.45|      20|      22|     438|     457|       6
---------------------------------------------------------------------------
  438-  457 (36.55/23.62)	EAATDYFSISRKI.G.EGGYGP
  460-  481 (25.90/14.82)	KAQLDHTSVAIKVlGpDISQGP
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP16697 with Med32 domain of Kingdom Viridiplantae
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