<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP16657
Description |
Mediator of RNA polymerase II transcription subunit 13 |
Sequence | MWTNVFRIGELQTISWFQFLPCDSDPNSLPEKSLKAEQKDAATHLILSAHLQLQNEGFLSTWTNSFFGPWDPSQGVHNPDEKIKLWLFLRGRHSSIIDTAQSAVSRLRVVGSGLWLAPGDSEEVALALSQALRNYIERALRGFSYVRFGDVFTRCHPFTPNEKSFRRAQPTFEFIFSATEEAIYVHAIISAKHIRGLCGDDIERISRNGSSRSTREGLPVIVGPNGMRGRLTGCCPSDLVKQVYISNSKVSNGFTVGVRFPVAQSSGCQLRGQSCYVEVTLGCPSTCSDKVLESNSNQSNNAIRPHTEESHFSSVGKGQQKQGTIYQLPILERTFIYPADAVVIPMMHRAFARSSVKRFWLQNWVGTSVLEMWPIWNFLGSSRIEHCFAFGNTCCSGPLDGLGGEFSGMRLQKQYNSSSNSITSSISSVSSTSSDSEYAVAAGAGDLEADADSLTCRHSGLSSNDQFENDGRKMVSKRARTGTTETTGQAGTVVSATIQDAYNTEYSVAEANNSAAAGAANIQVGSRWDWDDDDRGVGMDIQALISEFGDFGDFFENDVLAFGEPPGTAESQAFIFPASDCGDISGSPMGGMEVSHQKLSPVGLASFEGINPQSTALTEDTRNHSAEFTKDARSSVLGTHSSTPSTGKFDYLTKAEAMMTFAPEYAAVEMPASELPTSIFKSPYLPRSRKVESSHSSSVAYVYNAAPPSPRMMTLEEKPEVSAKLKLGSMGHGGNLSFQSSKFYTHVQSGTKKTNKRSVNDDVSSREGDVSFCLSSISSLTTVPTLQRKNQNMLETAHFLLSLKTVLATELECTMFQAAMCRIRHTLLSLSNKVPIGLRSTISDLVQSDTSTKSDIMTGKYEIKKKDNIPVRIAGDSDGGMHDGPVTAQVGVWRSVGAPKGTKSSITRNSENSSSLLLSTLHDENLNVYGQRQPLQDLLDAMALLVQQSTSFVDVSLDSDDGDGSYCWLALQEQRRRGFSCGPSMVHAGCGGLLATCHSVDIAGIDLIDPLSADIQASSVISLLQSDIKLALKSAFGILDGPLSAIDWCRGRGQSGDSKATGDGYSFQCTVSEAKDSSSTVTLAGEPISPPQSTGGSSCIREGARIDESSQRRSSQEICNSESEQQKGYCRFRPILTILPLPAIRVGYQDDWLDMPAKNLQFWEKGPLEPYASPKPIIFYALCPDIDLLSSAAADFFQQLGTIYEACKLGTHSPQIGGQMDPSSAKCLPSGLVLLDCPQQVKIASNHITAISSIRDYFLALSKGWNVKNFVKSLTKVIKELKLAPNLSVNQKEGSSGPCTVVYVVCPFPEPRAVLQTLIECASALGSVVLSPDKERRSLLHSHVARALNCTAAADEASASNVVMLSGFSIPKLVLQIVTVESLLGINRPVNELAILKDIAFTVYNKARRIPWAAPASDVLQSSAASGRSQSTLMHVTSPIPGLWKDCHAPRLSGPTLTREAELDSALRPGTWDNSWQPSRGAGLTCEPIRPVDLCGQDDTRYMFEPLFILAEPSSVEHGTPSTVFGSAVSETSSLKSVIDDSGMYMQSSTSGTNADIGTTSLLDGSEHDSKTASLHCCYGWTEDWRWLVCIWTDSRGELLDSYIFPFGGISSRQDTKVLQSLFVQILQQGCQILSCPSTDSSTARPRDIIITRFGCFFELECQEWQKAIYSVGGNEVKKWPLQLRRSMPDGIPSTTNGTSLQQQELGLIQDRNLLSSPGPSLYSPHSKSSFIKGGLAQSSTKKQLLAGQTGVDSARGLLQLVQSISLIGVSIDHTLHLILQPDASSAGGGSQSTSSSSLSGYLEGFTPVKSLGSMQESLLLIPSPSLRYLPSTPLQLPTCLTSESPPLAHLLHSKGSAVPLATGYVVSKAVPTMRKDPTELTKEDWPSILAVSLVDHYGRNNNSIQEKMVRGAGNITVGKQGRSLNPEAINRDCEMETHLVLESVAAELHSLSWMTASPVYLERRTALPFHCEMLLRLRRLLHYADKEFSRPPEKAHQT |
Length | 1999 |
Position | Kinase |
Organism | Phoenix dactylifera (Date palm) |
Kingdom | Viridiplantae |
Lineage | |
Aromaticity | 0.07 |
Grand average of hydropathy | -0.235 |
Instability index | 54.60 |
Isoelectric point | 6.01 |
Molecular weight | 216827.17 |
Publications | |
Function
Annotated function |
|
GO - Cellular Component | |
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP16657
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 968.58| 230| 236| 983| 1218| 1
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983- 1218 (372.47/227.73) PSMVHAGC...GG...........LLATC.HSVDIAGIDLIDPLSADIQASSVISLLQS.DIKLALKSAFGILD....GPLSAIDWCRGRGQSGDSKATgdgYSFQCTVSEAKDSSSTV....TL....AGEPI.SPPQSTGGSSCIREGARIDESSQRRSSQEICNSESEQQKGYCRFRPILTILPLPAIRVGYqddWLDMPAKNLQFWEK.....GPLEPYASPKPIIFYALCPDIDLLSSAAADFFQQ..LGTIYEACKL.G....THSPQIGG
1222- 1454 (285.87/162.25) PS..SAKClpsGL...........VLLDCpQQVKIAS.NHITAISS.IR.DYFLALSKGwNVKNFVKSLTKVIKelklAPNLSVN..QKEGSSGPCTVV...YVV.CPFPEPRAVLQTLiecaSA....LGSVV.LSPDKERRSLLHSHVARALNCTA..AADEASASNVVMLSGFSIPKLVLQIVTVESL.LG.....INRPVNELAILKD.....IAFTVYNKARRIPWAA..PASDVLQSSAASGRSQ..STLMHVTSPIpGlwkdCHAPRLSG
1488- 1722 (310.24/176.83) PIRPVDLC...GQddtrymfeplfILAEP.SSVE.HGTPSTVFGSAVSETSSLKSVI.D.DSGMYMQSSTSGTN....ADIGTTSLL..DGSEHDSKTA....SLHCCYGWTEDWRWLV....CIwtdsRGELLdSYIFPFGGISS.RQDTKVLQSLFVQILQQGCQILSCPSTDSSTARPRDIII....TRFGC...FFEL...ECQEWQKaiysvGGNE..VKKWPLQLRRSMPD.GIPSTTNGTSLQQqeLGLIQDRNLL.S....SPGPSL..
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 87.40| 26| 26| 790| 815| 2
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790- 815 (43.54/30.00) NQNMLETAHFLLSLKTVLATELECTM
817- 842 (43.87/30.28) QAAMCRIRHTLLSLSNKVPIGLRSTI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 67.99| 20| 26| 563| 582| 3
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563- 582 (39.96/25.72) GEPPGTAE.SQAFIFP...ASDCG
586- 609 (28.03/15.33) GSPMGGMEvSHQKLSPvglASFEG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 67.43| 20| 26| 663| 687| 4
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668- 687 (36.13/27.39) VEMPASELPTSIFK.SPYLPR
691- 711 (31.30/11.41) VESSHSSSVAYVYNaAPPSPR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 33.59| 10| 26| 138| 148| 6
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138- 148 (14.21/12.33) RALRGFSYVrF
167- 176 (19.37/11.23) RAQPTFEFI.F
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 87.79| 27| 29| 226| 253| 8
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226- 252 (51.53/30.01) GMR...GRLTGC..............CPSDLVKQVYISNSKVSN
257- 300 (36.26/14.57) GVRfpvAQSSGCqlrgqscyvevtlgCPSTCSDKVLESNSNQSN
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