Description | pre-mRNA-processing protein 40A-like isoform X1 |
Sequence | MASNSQFSGVQPLRPAVVRSAVPPQNFGPPMPMQFGHVVPAQQTHQFIPAASQQFRPVGQGVHGTNIGMPSDQTQMPHFSQPAHHLPPRSGPAAPPSSQAVPMPYVQPNRPMTSGTLQPQQNPQMPHNHLPNFGGVGMPLSSSYTFTTSYGQPQHTFNTPSQYQPASQMHAPVMPAVGQPWSTHGTQNVPLVTHLVQAAAQSSAAAGTVPTTNAQPSSAEQASSDWQVHTSDDGKRYYYNKKTRQSSWEKPFELMTPVERADASTDWKEFSTPDGRTYYYNKVTKVSKWIIPEELKLAREQALRAAAAQPCTETGAASAVPAAPVVSSGEIPPATASVTPEATYAVVSSPVSVSANAIVPPGVMASVSPSVAVVPSAGIPSSSSLGILNTVGASNPQTPVTPLLAPVPANTVVPTVAIEAALSNAKSNHDNSSLVNIASLPDGASAQDLEEAKKGMPVTGRSNAASLEEKTIDEEPFVYANKQEAKNAFKTLLESANVESDMTWEQAMRVIISDKRYGALKTLGERKQAFHEYLGQRKKQEAEERRIKQKKAREDFTRMLEECTELTSSTRWSKAVTMFENDERFNAVERARDREDLFESYLLDLLKKERAKAAEEHKQNIMDYRAFLESCDFIKANSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYIHNLEKEEEEQRKKQKEQLRRQERKNRDEFRKLMEGHVAAGILTAKTHWRDYCMQVKDLPPYKAVASNTSGSTPKDLFEDVAEELDKQYHEDKVQIKEAIKIQKIALASSWMFEDLKVAISADDSLKGISEINMKLVFDELLERLREKEEKEAKKHQRLADNFSDLLYSIKEITASSGWEDCKSLFEDTQEYRSIGDENFVRGIFEEHVARLREKLKEKERKREEEKAKKEKEREEKEKRKEKERKEKEERKEKEREREKDKGKDRSRKDEAGSENVDMMDSYGSKDRKREKDKERKQRKHHHSMADDVSSEKDEKEESKKSRRYSGDRKKSRKHSYSSDSDSDNRHKRHKKDRDGSHRNNGYEELEDGELGEDGEIFKNHVPGH |
Length | 1053 |
Position | Unknown |
Organism | Phoenix dactylifera (Date palm) |
Kingdom | Viridiplantae |
Lineage | |
Aromaticity | 0.06 |
Grand average of hydropathy | -0.976 |
Instability index | 54.12 |
Isoelectric point | 6.72 |
Molecular weight | 118996.46 |
Publications |
Annotated function |
|
GO - Cellular Component | |
GO - Biological Function | |
GO - Biological Process |
Binary Interactions |
Repeats | >MDP16651 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 5| 196.64| 32| 32| 881| 912| 1 --------------------------------------------------------------------------- 525- 549 (29.71/11.14) ........ERKQAFHEYLG.QRKKQEAEER..........RIKQ 881- 912 (48.64/22.88) REKLKE.KERKREEEKAKK.EKEREEKEKR..........KEKE 916- 957 (37.64/16.06) KEERKE.KEREREKDKGKD.RSRKDEAGSEnvdmmdsygsKDRK 958- 990 (40.18/17.63) REKDKErKQRKHHHSMADDvSSEKDEKEES..........K.KS 991- 1021 (40.46/17.80) RRYSGD.RKKSR.KHSYSS.DSDSDNRHKR..........HKKD --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 6| 191.23| 22| 25| 70| 91| 2 --------------------------------------------------------------------------- 30- 44 (28.27/10.54) P........MPM..QFGHVV..PAQQT 49- 65 (25.52/ 8.92) P..AASQ.QFRPVGQGVH.......GT 70- 91 (45.49/20.73) P..SDQT.QMPHFSQPAHHL..PPRSG 96- 115 (32.14/12.83) P..SSQAvPMP.YVQPNR....PMTSG 119- 135 (32.26/12.90) P..QQNP.QMPH.....NHL..PNFGG 139- 164 (27.55/10.11) PlsSSYT.FTTSYGQPQHTFntPSQYQ --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 180.64| 38| 38| 216| 253| 3 --------------------------------------------------------------------------- 165- 212 (43.55/25.49) PASQMHApvmpavGQPWSTHgTQNVPLVTHLVQAAAQSSAAAgtvPTT 216- 253 (70.94/46.57) PSSAEQA......SSDWQVH.TSDDGKRYYYNKKTRQSSWEK...PFE 257- 294 (66.16/42.89) PVERADA......STDWKEF.STPDGRTYYYNKVTKVSKWII...PEE --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 6| 408.42| 65| 65| 555| 619| 4 --------------------------------------------------------------------------- 489- 553 (24.35/10.18) .FKTLL.ESAN...VESDMTWEQAMRVIIS.......DKRYGAL...KT...............LgerkqafheylgqrkkqeaeerrikqKKA...R.......... 555- 619 (101.85/68.19) DFTRMLEECTE...LTSSTRWSKAVTMFEN.......DERFNAV...ERARDREDLFESYLLDLL..........................KKE...RAKAAEE.HKQ 623- 690 (85.58/56.01) DYRAFLESCDF...IKANSQWRKVQDRLED.......DERCSRL...EKI.DRLEIFQEYIHNLE..........................KEEeeqRKKQKEQlRRQ 697- 762 (76.35/49.10) EFRKLMEGHVAagiLTAKTHWRDYCMQVKD.......LPPYKAVasnTSGSTPKDLFED.....V..........................AEE...LDKQYHE.DKV 772- 826 (56.89/34.54) KIA...........LASSW.......MFEDlkvaisaDDSLKGI...SEI.NMKLVFDE.LLERL..........................REK...EEKEAKK.HQR 830- 880 (63.39/39.40) NFSDLLYSIKE...ITASSGWEDCKSLFED.......TQEYRSI...GDENFVRGIFEEHVARL............................................ --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 4| 123.93| 26| 26| 324| 349| 5 --------------------------------------------------------------------------- 324- 349 (44.85/23.08) PV.VSS.GEI.PPAT.ASVTPEATYAVVSS 350- 376 (24.90/ 9.87) PVsVSA.NAIvPPGVmASVSP..SVAVVPS 380- 398 (20.16/ 6.72) PS.SSSlGIL.NTVG.AS.NPQ.......T 399- 424 (34.01/15.90) PV.TPL.LAP.VPAN.TVVPTVAIEAALSN --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) EIFKN 2) GYEELEDG 3) HHSMADDV 4) HKRHKKDR 5) SKKSRRY | 1044 1030 970 1015 987 | 1048 1037 977 1022 993 |
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