<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP16590
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MPLILDNPMPVELNDVDDLFGDGVGLSLPARAQSKQLQQRMDDVRIRGCCQTVAWSRTGTIANITPDGQNLELRFLRRSPEDGSWDLSEPTTCPFVKGLPTIPIVHLVWAGTSSPDLAVIDAVGRVSIVSFSISLNHPFPQRKWDADPTDDVHTVVGAYWLNVSPPNQQASYNVMYGPATKHGNGYTYESSFVHAGGPTHPSPAKSALLTITTHGVIRMFWSQNTNRLEETTMELESISASDELITHASFASEKKHLLLAVATTSKQLKLIKIEIQWGQASQADKATGRPAGNLSPSLVEKHLATTNWLQGGPGDSSLDISMIELSHLEVLPSVVDSTGKNTTPPMVVTARSRTPTESSYQGSQSVVDRWEAIEQKQNLPSAYEQLGGRRNSISSELPAVTQLQKVAPVTANKVVVAFQTTSFGKILVLAFADGTVEYRDRLTFEELYTTQELNKVQNLRQIGWTFTDEGPCQQVAFSPTFCSMVQMGEDGKIKWNKLHYPMGDIGNSMHDAQYCGSIAALTVTAAPSMFYQNNYDDLLAIVRPYTTKKRFVQDLVTELIRILKIQIDYSEEIHHDSLVRNGSLQYCLSIMNALGFRGDFHPRSFQGKFSMLFLNVRNVVVLITIASNTPVTVREKLSPLDDPEVIETLVGCARWALDLIAWLMDCLFELMNDNHFQELLTRERFHELAPYLHEKNNVAFHFLMSSSSRGFLSAICRRLAHLEALSGRAIEFYRKQSAVVEGVAGGRAAPQLQQAYQAMQQVTSSALVKVSEVETLLTGLSNEIRQAYQIFLPSLAKSQNNQSQGKQLDMTMKAARVQMELSILLSAAPPAPFLQIIKKFFNTDLPAFRNTVDPGRLFFANYDLLEVEDDEHSLAAKKARGMVYVDVFKRMQIRPSPNKQWRRCSRCTAVMEDVFGSRSGFTFVLGQQRKCSCGGQWTLLPKGHVA |
Length | 946 |
Position | Tail |
Organism | Fusarium oxysporum (Fusarium vascular wilt) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes>
Hypocreomycetidae> Hypocreales> Nectriaceae> Fusarium>
Fusarium oxysporum species complex.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.204 |
Instability index | 47.45 |
Isoelectric point | 6.56 |
Molecular weight | 105216.79 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP16590
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 55.12| 14| 230| 75| 88| 1
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75- 88 (27.56/16.74) FLRRSPEDGSWDLS
308- 321 (27.56/16.74) WLQGGPGDSSLDIS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 104.62| 36| 230| 525| 591| 2
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249- 284 (58.62/24.35) SFASEKKHLLLAVA...TTSKQL......KLI...KIEIQWGQASQAD
529- 576 (46.00/76.11) MFYQNNYDDLLAIVrpyTTKKRFvqdlvtELIrilKIQIDYSEEIHHD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 54.56| 17| 30| 740| 757| 7
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740- 757 (25.74/24.30) VEGVAGGrAAPQLQQAYQ
773- 789 (28.82/21.03) VETLLTG.LSNEIRQAYQ
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