<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP16585

Description Related to manganese resistance protein
SequenceMKEASPDPPNIDGSRSGAQPAAPTAQGLNEHSNTQHKEFNEKQNGSSGSVNGGDRQGPSRNNSSLLKALSAGDIPSHTASQAARPGSVIETPNKAEEPSQENPNPTSKMNRFFAEVKRSVKISIFHSWLNILLIFVPVGIAVSQVDGINGGIVFGLNAVAIIPLAGLLAYATESVARKMGDALGALLNVTFGMSMLLGGLRFREQVYNSTVTQMSACLLSLSVISLVLPTAFHASFQDNDLADRQSLKISRGTSIVLLLVYVIYLMFQLKSHAYMYESTPQHIIDAELAPGPAAGLLDSSSSDDSSSSSSDSSDSDSSHGTMRKKMKKVLRNRRHRRSSTASVDTADTKGTRSASFTTTNTTPQDEVSEATASRHRFPRFPSYEGSESAIEEEDEEEAKRSRRRRRYRRHRHRKSKKQARDAKKAAGVTEAQNELPENAPQNNSECEPRRVDFAVQDDLEAGPSNTGKRPFPLRGLSVKNIPPVFTEKSTVASTPVPHVRYGIRRTNSLPDRLQFRAPGAMLPSSVPPILTAPGAHMIAKEQENEEDHLTQSGAIILLLVSTALVAVCAEFLVDSIKEVVETSGVNEVGIGLIILPIVGNAAEHVTAIKVAYKNHMDLAIGVAVGSSIQIALLLTPAMVILGWIIDKDMSLYFTLFETVCLFVSAFIVNFLVLDGRSNYLEGALLCAVYIIIAVVAFFYPNE
Length702
PositionKinase
OrganismFusarium oxysporum (Fusarium vascular wilt)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes> Hypocreomycetidae> Hypocreales> Nectriaceae> Fusarium> Fusarium oxysporum species complex.
Aromaticity0.06
Grand average of hydropathy-0.185
Instability index57.19
Isoelectric point7.01
Molecular weight76022.33
Publications









Function






Annotated function


GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW

GO - Biological Function
GO - Biological Process
transmembrane transport	GO:0055085	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP16585
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      76.75|      25|      27|     355|     380|       1
---------------------------------------------------------------------------
  355-  380 (39.45/29.41)	SFTTTNTTPQDE.VSEATASRHRfPRF
  382-  407 (37.30/22.41)	SYEGSESAIEEEdEEEAKRSRRR.RRY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      77.39|      25|      29|     475|     499|       2
---------------------------------------------------------------------------
  475-  499 (42.39/27.28)	GLSVKN.IPPVFTEKSTVASTP..VPHV
  502-  529 (35.01/21.24)	GIRRTNsLPDRLQFRAPGAMLPssVPPI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     113.81|      29|      29|     166|     194|       3
---------------------------------------------------------------------------
  132-  157 (33.68/19.27)	.LLIFVP...VGIAVSQVDGING........GIVFGLN
  166-  194 (45.75/28.62)	GLLAYAT...ESVARKMGDALGAL......LNVTFGMS
  198-  235 (34.38/19.81)	GGLRFREqvyNSTVTQMSACLLSLsvislvLPTAFHAS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP16585 with Med13 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) AGLLDSSSSDDSSSSSSDSSDSDSSHGTMRKKMKKVLRNRRHRRSSTASVDTADTKGTRSASFTTTNTTPQDEVSEATASRHRFPRFPSYEGSESAIEEEDEEEAKRSRRRRRYRRHRHRKSKKQARDAKKAAGVTEAQNELPENAPQNNSECEPRRVDFAVQDDLEAGPSNTGKRPFPLRGLSVK
2) MKEASPDPPNIDGSRSGAQPAAPTAQGLNEHSNTQHKEFNEKQNGSSGSVNGGDRQGPSRNNSSLLKALSAGDIPSHTASQAARPGSVIETPNKAEEPSQENPNPTSKMN
294
1
479
110










Molecular Recognition Features






MoRF SequenceStartStop




1) APTAQGLNEHSNTQHKEFN
2) RRHRHRKSKKQARDAKKA
22
408
40
425