Description | Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MPGLVMDDVSASASRDWGDSYNRHGSNGDPTVMREAQQVDNFGKSDNPQQVNGFKGDDGKGQGSNTAIVLKNGQSGVMPNGVQGQWAPPLMHITQGFFPYSQLVHRAVQQCYNDLCDVITELADSTQQQQSSSANGKPDPAAIQKRIRILEFAQTKRTEFIKLLVLSQWSRQAVDVSKLIDLQNFIRTRHFAYQTAVQRVADMKRDLVRAQVANPDLQTALEVLTTGRVSNMPEFGYKPPKPLSSKRLLATLRKINRIISTRLVTSDTVPPPLNEYRVHDGRVTFSVQGEFELDLSIAEEDVASQFYFIDIRFLFAPSSPIPKGRFFNELDSQINGILKTKGLTGCFDFIHNLVLVNKINILFKQATSLSRGQWTGALRVELLHRILVVHYWPDKSGPKSWLEIGAHSGRQQRQKVSYLGLRWVRDGKECESSQIHFNTETLSMESILRSVIAIHSSHTLRAVYERLCTQDLFANHRLSIYMQMSKIEPGNCRLNVQLTETRFLNASLEPVSGAMCIHTIPSLLCRLDKGSASDDDFVNRISRLRCIAAMEEIESDAKIFGWESVDHRKFKVDIRRVFPNNILRASFFRNRLWGNSWIIAATTSLSGDDWWILRLKARPSSYPDGPGHGRVVAGGFSVQSTRVSSSVQLLSPRESGYHFPDLDYSLTGALVMYSNALWLSELGYQDVLPPVDQLQLGSRLEVPCLYLKFDSAKLPKQLRIGPLDGTQSKSYVRETLTISYHGIDSRTKNAIVVAHGRFHTALRKMGLKRLKLDDCILLRRGGTAFAMRFLVAPGQSIMIDLFERIQRLNIVLSLFHTLQQNKITVKSVSLSSLSFVYAPREGFEANIVIRLDGPSHAPDLDPTVIRLQNEPLFRLRLDMSFNNLSPHNRIKQSLGMILNQSGPGNGVQCVLQLLKLTLSVLHALDRLVTEPQHNSALRVQVSIRGAHTYQIHYFGLRFRFLLNASHRRDKIIWTLKDISSAEGQRDVEHAVEAKLQEKIYRGKGDGWQGLGNGAVAEVDQVGNLLSELDSCFADLTPPPAPPAAPRETAEKKPGKATKDKGPKTNGTSKVTNRQPQEVPKETDVIMID |
Length | 1088 |
Position | Tail |
Organism | Penicillium sp. 'occitanis' |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes> Eurotiomycetidae> Eurotiales> Aspergillaceae> Penicillium. |
Aromaticity | 0.08 |
Grand average of hydropathy | -0.307 |
Instability index | 41.28 |
Isoelectric point | 9.37 |
Molecular weight | 121995.07 |
Publications | PubMed=28951729 |
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 ARBA:ARBA00003669 ECO:0000256 RuleBase:RU365082 |
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP16561 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 88.29| 27| 32| 487| 517| 1 --------------------------------------------------------------------------- 487- 517 (44.63/44.87) IEPGNCRLN.VQLTETRFLNaslePVSGAMCI 520- 547 (43.66/32.68) IPSLLCRLDkGSASDDDFVN....RISRLRCI --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 48.01| 14| 15| 692| 705| 2 --------------------------------------------------------------------------- 692- 705 (24.37/14.15) DQLQLGSRLEVPCL 710- 723 (23.64/13.50) DSAKLPKQLRIGPL --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 149.00| 45| 283| 42| 136| 3 --------------------------------------------------------------------------- 42- 89 (79.70/112.62) FGKSDNPQQVNGFKGDDGKGQGSN....TAI.VLKNGQSGVMPngvQGQWAPP 191- 240 (69.30/23.54) FAYQTAVQRVADMKRDLVRAQVANpdlqTALeVLTTGRVSNMP...EFGYKPP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 103.24| 33| 283| 587| 629| 4 --------------------------------------------------------------------------- 587- 629 (48.86/58.23) FFRNRLwGNSWiiaatTSLSGDDwwilRLKARPSSY..PDGPGHG 872- 906 (54.38/33.57) LFRLRL.DMSF.....NNLSPHN....RIKQSLGMIlnQSGPGNG --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 126.32| 38| 487| 439| 477| 9 --------------------------------------------------------------------------- 439- 477 (61.83/39.98) TETlSMESILRSVIAIHSSHTLRAVYERLCTQDLF.ANHR 929- 967 (64.49/37.74) TEP.QHNSALRVQVSIRGAHTYQIHYFGLRFRFLLnASHR --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 69.11| 18| 331| 319| 336| 10 --------------------------------------------------------------------------- 319- 336 (34.02/19.21) SPIPKGRFFNELDSQING 651- 668 (35.10/20.04) SPRESGYHFPDLDYSLTG --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) ETAEKKPGKATKDKGPK 2) GTSKVTNRQPQEV | 1047 1066 | 1063 1078 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab