<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP16467

Description Uncharacterized protein
SequenceMRGHEQSSIPLYKSQPPAWLPKAHSAGELGYPGFYPPHSGQEEDILSESNIKNGFVLPPSVQMETFSAQSTVTESLHGQDTISKLEELMNEVFARRLHQIPSIPLSTFRVPSRVTLNDTKRQAWFADLANPDVPLNKLGKSVPHGAKGHDLLDLLHSNNIAIPRAVWFLRVFGANETAGLRNRPSYNPTQYSVEWAGVVTGYMKKQLADIALPSAPRPGMNIKQTFKGVLADTGTRDRWISRFTYCLKLLRAFYKEGLVDRRTFLVWVVHQMGICNLAQAGFIARIADEYLEGMMSSRPLTRPFVEACVSKLSEIGSSASREFLVDTEGLLKAILQRFCLALPDAFVSPRMWATHSSLLLAVLTENIMDQTFDGQNPSEIHQVLIRNVADIQRRNEAMLFYNLPPLASDRLGSSVLDIKLLNSISRTTDINSISFFSDSILDDPKHKLDMLLTWSITPLQFGDHRPFAAITLIRNWRQRAGERALRREDRSPDEFIQDQLFNWLDSSEVAGDPKNTRAVALLFGKLIQRELFSYGSYIQRLIARGEPGLSFNDAVESRHRLFLRWISLSEPSQLNQRKVTLYGVRARDTPEEGTERQMRKEIRAVMPQLFEGGPEPLLKSPDALFRQCKTFVSSPLYEQVRTLKLWLLPILEKSISSISVIDNVLKSYCIAVELMAETKCFRSILNLTLCLLEHASTTDSLNTAIDTLRRFHTLWSCMDVVGSIVTSLQTAHQIWKSKGMQTRVLLVLLKELDDNRFLSAQARDQLNAEISYYSMTLQPVIVGHPEPVPSVLPEILLLAGDYEEDAPSTLANGLWIKYRMSFDWAWKVWDNTIASLRQIPLMVPDTEGRRGCALRYATFLRHVDHLLPTGLDDHVLGWFLGPGKSEVVNLTADVWDIVTLLLLGLVVHGALKTTTIMTGLVYPAWQCASSSVELPLQQMEVFLAAANNLVQGLLLRGEGSSGIMPPCDLFDVQRLQTRKQDVYCEPHFPALVSNIPILVSLENNERIPEHLRTELKAIRHSLYEDDNFRQGTFRNLDALREAFEQAMQLKENTSPEVGDRTMAALRMIFSEAPDEDIEISSWPEKSSFLSPWMISATTIQLQFFLKQMERSINKESHAYDTACMTLDKLTSVIFDHTLSSDEACFVTQMTQGVGSAVAGKIINNGLRFLTGVLRDPSSDTGTSLARAGESFRILIYVAEPLRQESAHLPVLDPDVQDMFFSTLCSKFASIEEATHNPDAMTVDRTDFTQEVVLLARFLQFDLSFEGAWTASTTESSRKLCASLYRLTLLFASGNTFDPIAYPLLLDTLYYLIDEAPTSTKMNAFDPFINYPDITPSDFAPDIPFHYLTQLRSLLPHLPAVSSVADLASCHRDASGKLVQDAPVVNRPWEWIENLGEPSVPEERFREGDDRVKYQVKNSGSISLDTFGARMTGEGIITSKYDDERIEANMRMFEDGLSADNVFKRDWRETRLTVEIEGMALTAGRKAGMSGSQELVPRVASPGASSSRIGKSPARSSLHRSTNSTRSGSVEIIDVDSVSSSTMRKGVKRKAATSDDEVIIVDGPSKGGSSSSTKSKPKPKARKR
Length1583
PositionKinase
OrganismArmillaria solidipes
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Agaricomycotina> Agaricomycetes> Agaricomycetidae> Agaricales> Physalacriaceae> Armillaria.
Aromaticity0.08
Grand average of hydropathy-0.207
Instability index46.70
Isoelectric point5.99
Molecular weight177309.36
Publications
PubMed=29085064

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP16467
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     120.95|      36|      63|    1484|    1519|       1
---------------------------------------------------------------------------
 1484- 1519 (60.98/39.32)	RKAGMSGSQELVPRVASPGASSSRIGKSPARSSLHR
 1548- 1583 (59.98/38.55)	RKAATSDDEVIIVDGPSKGGSSSSTKSKPKPKARKR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     168.48|      55|      63|     459|     519|       2
---------------------------------------------------------------------------
  459-  519 (87.00/56.29)	LQFGD..HRP.FAAITLIRNWRQRaGERALRREDRSPDefiQDQLF.NWLDSSEvaGDPKNTRAV
  521-  579 (81.48/39.67)	LLFGKliQRElFSYGSYIQRLIAR.GEPGLSFNDAVES...RHRLFlRWISLSE..PSQLNQRKV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     197.31|      63|     439|     588|     694|       7
---------------------------------------------------------------------------
  314-  384 (93.66/47.38)	EIGSSASREFLVDTEGLLKA..ILQRFClalpDAFVSPRMWATHSSLLLAVLTenIMDQTFDgqNPSEIHQVL
  601-  665 (103.64/113.37)	EIRAVMPQLFEGGPEPLLKSpdALFRQC....KTFVSSPLYEQVRTLKLWLLP..ILEKSIS..SISVIDNVL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.96|      15|      40|      59|      73|      10
---------------------------------------------------------------------------
   59-   73 (27.10/15.01)	PSVQMETFSAQSTVT
  101-  115 (27.87/15.63)	PSIPLSTFRVPSRVT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     121.64|      37|     905|     420|     458|      12
---------------------------------------------------------------------------
  420-  458 (61.05/38.79)	LLNSISRTTDINSISFF........SDSILDDPKHKLDMLltWSITP
 1311- 1355 (60.59/33.15)	LIDEAPTSTKMNAFDPFinypditpSDFAPDIPFHYLTQL..RSLLP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.63|      15|     441|     810|     826|      14
---------------------------------------------------------------------------
  810-  826 (27.99/24.61)	LANglWIKYRMSFDWAW
 1254- 1268 (28.65/17.53)	LAR..FLQFDLSFEGAW
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP16467 with Med12 domain of Kingdom Fungi
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