<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP16414

Description Uncharacterized protein
SequenceMNLETRLTGTLNDVLRTSGYIFEIINNNKRQSNLITGPNNQLIPPPITAQLAASVAQFDSILDDTVSKFNDARWCVEQIVENKQKQEELRIQEEIERKKRLEEQRRREEEEKKRREEEEARRKEEEERREKEAKEQEERARQERERLEREKQEKERKELEEKQRREEQERNNSNNNNNDLDMMDTGLDFDMDLDKGVPGIPNPSDILSSISYKGPGGDKNDKNKDPMDLGLNSILGEGQDFDDLNMDLLGQEFDAGGVNPDEEFDVDNFLNQFGND
Length276
PositionTail
OrganismCandida auris (Yeast)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Saccharomycotina> Saccharomycetes> Saccharomycetales> Metschnikowiaceae> Clavispora> Clavispora/Candida clade.
Aromaticity0.04
Grand average of hydropathy-1.402
Instability index69.10
Isoelectric point4.58
Molecular weight32301.93
Publications
PubMed=27988485

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP16414
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      93.59|      21|      21|     117|     137|       1
---------------------------------------------------------------------------
   94-  115 (28.17/ 8.69)	EiERKKRLEEQRRREEEEKKRR
  117-  137 (34.41/12.03)	E.EEARRKEEEERREKEAKEQE
  159-  179 (31.01/10.21)	L.EEKQRREEQERNNSNNNNND
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      60.75|      18|      21|     202|     221|       3
---------------------------------------------------------------------------
  202-  221 (30.36/24.28)	NPSDI.LSSISykGPGGDKND
  225-  243 (30.38/17.17)	DPMDLgLNSIL..GEGQDFDD
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP16414 with Med2 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) QEELRIQEEIERKKRLEEQRRREEEEKKRREEEEARRKEEEERREKEAKEQEERARQERERLEREKQEKERKELEEKQRREEQERNNSNNNNNDLDMMDTGLDFDMDLDKGVPGIPNPSDILSSISYKGPGGDKNDKNKDPMDLGLNSILGEGQDFDDLNMDLLGQEFDAGGVNPDEEFDVDNFLNQ
86
272










Molecular Recognition Features






MoRF SequenceStartStop




1) DILSSISYKGP
2) MDLGLNSILGEGQDFDDLNMDLLGQEFDAGGVNPDEEFDVDNFLNQFGN
205
227
215
275