<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP16394

Description Serine/threonine protein kinase
SequenceMKVSGGSSPEMATVAVAVKSAKGSGSQRAVQWAVENLMHKADRLVLVHVMPKVNCVPTPSGGTIPIKELDESVVEMYIQDTRAQCEESFQTFKYLYTNKKIEILLLEGDNPAFALLRYICNSRTRSLVLGSGSTSYFARKPKDSEVPSIVLKHAPDTCNIYVISANKLISNSLNPMLTTEKENDSHARSEQGSSLSSSSIMSNYHDCLSDVSHPHSQAQEPRFSSMYSDAVQKAANQVSEYSLLDVTRNKGFQSISSTYSEQSYIQTEIERLRLELENTLTMYNRACEDLVLAQSKVNLLSSECIQEAQRVKAAEKREQNLKKIAAVEKEKYLEAEKEVEMAKELLARERYERQIAELKAHEESLKKKKIVDALISSDRRYRRYTIDEIQMATSSFAENKMIGEGAYGRVYQCSLDHTSVAVKVLHPDASDRKEEFLREVEVLSQLRHPHIVLLLGACPESGCLVYEYMENGSLEDHILRRRGRPLPWHIRFRIAFEVACGLVFLHQSKPEPIVHRDLKPGNILLDKYYVSKIGDVGLAKIIHDVVPDNVTEYGDSVIAGTLFYMDPEYQRTGTLRPKSDLYSFGVIALQLLAARHPNGLIMKFENALSNGILPDILDKSVVDWPPSETEELAQIALKCCQLRCRDRPDLEKEVLPILKRLADFANSSLTGRNLRHAPKHYYCPIMQEIMDNPHIAADGFTYEHDAIKAWLDRHNVSPVTKQKLQHKMLIPNRTLHSAIQEWKRRATSPKA
Length751
PositionTail
OrganismHandroanthus impetiginosus
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Lamiales> Bignoniaceae> Crescentiina> Tabebuia alliance> Handroanthus.
Aromaticity0.07
Grand average of hydropathy-0.405
Instability index52.15
Isoelectric point7.12
Molecular weight84932.13
Publications
PubMed=29253216

Function

Annotated function Functions as an E3 ubiquitin ligase. 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein serine/threonine kinase activity	GO:0004674	IEA:UniProtKB-KW
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP16394
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      78.93|      24|      48|     577|     600|       1
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  577-  600 (41.44/27.50)	PKSDLYSFGVIALQ..LLAARHPNGL
  625-  650 (37.49/24.20)	PPSETEELAQIALKccQLRCRDRPDL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      57.41|      13|      48|     338|     350|       2
---------------------------------------------------------------------------
  338-  350 (18.93/10.61)	EVEMAKELLARER
  357-  369 (18.30/10.03)	ELKAHEESLKKKK
  388-  400 (20.18/11.76)	EIQMATSSFAENK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     148.50|      51|     165|      71|     129|       4
---------------------------------------------------------------------------
   71-  129 (71.98/67.65)	ESVVEMYIQD.TRaqcEESFQTFKYLYTNK.....KIEILLLEGDNpAFALLRYICNSrtrsLVL
  236-  292 (76.53/48.28)	NQVSEYSLLDvTR...NKGFQSISSTYSEQsyiqtEIERLRLELEN.TLTMYNRACED....LVL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.76|      18|      25|     185|     206|       6
---------------------------------------------------------------------------
  185-  206 (23.00/31.37)	SHARSeQGSSLSSSSImsnYHD
  212-  229 (35.76/27.10)	SHPHS.QAQEPRFSSM...YSD
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP16394 with Med32 domain of Kingdom Viridiplantae
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