<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP16373

Description Serine/threonine protein kinase
SequenceMMVMVEIPHPINRISYPEIDLTDISLGSMRAGKEIVEEVAPETTPSPGVKEHVMFVALGKDVKESETVLMWALHKSRGMKICILHVHQPAQKIPMMGSKVPISMLAENQVKAHHENERQEMLEILDKYIRTCDRAGVEAERLWIEMDSIEDGIVQLISEHGIKWLVMGAAANKSYSKKMKEPKSKKAIHVRTEAPSFCHIWFVCKGNLIYTRQSKLGEFNVEAESPPFRASPNAEPAQSFKSRSLAEREKSQTMLQSHYRKVRSDNHRMQCLTLPDSLGGESPLSSSNPGGNSNLDSLSRRSPSVVSRFSTRSFSSTRSFSEITEDLAVTPLQDTEGNEVAFESPNVQRNGGDQCHSSVACNDIEGNMNDGLYDRLQQFVEEAESSHKEAYEESIRRRKAEKDVIDAIRRVKASETMYAEELKRRRETEDVLARGKEEAEKMKRQLDEVAEELRIAQEQKSSLECRIADSDKMVEELEQKMFSAVELLQKYKKERDELQVERDNALMLAEELRKRQSEEASSSSTSQFFTEFSFLEIEEATNSFSQALKIGEGGYGSIYRANLRHTQVAIKMLHPSSLQGPMEFHQEVNILSTLRHPNIVTLIGACPEAWALIYEYLPHGSLEDRLTCKNNTSPLSWKTRIRIAAELCSALVFLHSCYPQTIVHGDLKPANVLLDSNFVSKLSDFGICRKLPQDDCSENNTTLCCRTDPKGTFVYMDPEFLATGELTSKSDVYSFGIILLRLLTGRPALGITKEVQYALDKGNLKDLLDPTAGDWPFVQAKQLAHLAISCCDMNRRCRPDLVSEVWRVLEPMKVSCGASFLRVGSEDRCQIPSYFICPIFQEIMQDPVVAADGFTYESEALRGWLESGHDTSPMTNLKLPHCDLVPNHALRSAIQEWLHQP
Length901
PositionTail
OrganismHandroanthus impetiginosus
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Lamiales> Bignoniaceae> Crescentiina> Tabebuia alliance> Handroanthus.
Aromaticity0.06
Grand average of hydropathy-0.454
Instability index58.58
Isoelectric point5.69
Molecular weight101719.59
Publications
PubMed=29253216

Function

Annotated function Functions as an E3 ubiquitin ligase. 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein serine/threonine kinase activity	GO:0004674	IEA:UniProtKB-KW
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP16373
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      65.22|      19|      19|     446|     464|       1
---------------------------------------------------------------------------
  419-  433 (17.15/ 6.78)	.......AEELKRRRETEDVLA
  446-  464 (31.02/17.78)	LDE...VAEELRIAQEQKSSLE
  502-  521 (17.05/ 6.70)	RDNalmLAEELRKRQSEEAS..
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.63|      16|      19|     266|     283|       2
---------------------------------------------------------------------------
  266-  283 (22.77/23.74)	NHRMQClTLpDSLGGESP
  288-  303 (29.86/18.64)	NPGGNS.NL.DSLSRRSP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      37.28|      11|      19|     565|     575|       3
---------------------------------------------------------------------------
  565-  575 (20.99/16.05)	HTQVAI..KMLHP
  585-  597 (16.29/10.72)	HQEVNIlsTLRHP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.93|      16|     213|     310|     325|       5
---------------------------------------------------------------------------
  310-  325 (28.06/16.95)	STRSFSSTRSFSEITE
  524-  539 (28.88/17.64)	STSQFFTEFSFLEIEE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     109.92|      33|     158|     190|     225|       7
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  190-  225 (58.15/44.32)	VRTEAPSFCHIWFVC...KGNL...IYTRqskLGEFNVEAES
  347-  385 (51.77/31.83)	VQRNGGDQCHSSVACndiEGNMndgLYDR...LQQFVEEAES
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP16373 with Med32 domain of Kingdom Viridiplantae
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